RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TRAV41A0A0B4J266 112 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 FAM181BA6NEQ2 426 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 ATP5IP56385 69 aaPredicted RBP13.22□□□□□ -0.29
SSB-202ENST00000409333 C19orf54Q5BKX5 351 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 PRSS22Q9GZN4 317 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 CYTL1Q9NRR1 136 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 DEFA4P12838 97 aa13.21□□□□□ -0.29
SSB-202ENST00000409333 HBG1P69891 147 aa13.21□□□□□ -0.29
SSB-202ENST00000409333 HBG2P69892 147 aa13.21□□□□□ -0.29
SSB-202ENST00000409333 PVRIGQ6DKI7 326 aa13.21□□□□□ -0.29
SSB-202ENST00000409333 LILRB2Q8N423 598 aa13.21□□□□□ -0.29
SSB-202ENST00000409333 AP4M1O00189 453 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 SLC25A24Q6NUK1 477 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 MISP3Q96FF7 219 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 ATP5SQ99766 215 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 ZNF471Q9BX82 626 aaPredicted RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 TAAR5O14804 337 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 SOX15O60248 233 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 MLANAQ16655 118 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 ARSJQ5FYB0 599 aaPredicted RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 TMEM68Q96MH6 324 aa13.2□□□□□ -0.3
SSB-202ENST00000409333 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
SSB-202ENST00000409333 OPRK1P41145 380 aa13.19□□□□□ -0.3
SSB-202ENST00000409333 DEFA5Q01523 94 aa13.19□□□□□ -0.3
SSB-202ENST00000409333 RNASEH2CQ8TDP1 164 aaKnown RBP13.19□□□□□ -0.3
SSB-202ENST00000409333 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
SSB-202ENST00000409333 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
SSB-202ENST00000409333 IGHV3-48P01763 117 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 C4BPBP20851 252 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 CD69Q07108 199 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 Q8N2B8 174 aa13.18□□□□□ -0.3
SSB-202ENST00000409333 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
SSB-202ENST00000409333 DLK1P80370 383 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 Q6ZSV7 163 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 TMEM147Q9BVK8 224 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 ZNF355PQ9NSJ1 428 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 UQCC1Q9NVA1 299 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 CORTO00230 105 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 DFFBO76075 338 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 MT-CO2P00403 227 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 CFHR3Q02985 330 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 ATP6V1FQ16864 119 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 SLC16A13Q7RTY0 426 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 SLC51BQ86UW2 128 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 OR1L6Q8NGR2 347 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SSB-202ENST00000409333 I3L2K1 104 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 OR2J3O76001 311 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 GAMTQ14353 236 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 ZNF266Q14584 549 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 OR2T6Q8NHC8 308 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
SSB-202ENST00000409333 MRPL36Q9P0J6 103 aaKnown RBP13.16□□□□□ -0.3
SSB-202ENST00000409333 K7EIM0 57 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 TCF21O43680 179 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 JTBO76095 146 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
SSB-202ENST00000409333 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
SSB-202ENST00000409333 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
SSB-202ENST00000409333 UBAC2Q8NBM4 344 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 SERTAD4Q9NUC0 356 aa13.15□□□□□ -0.3
SSB-202ENST00000409333 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.36e-20■□□□□ 8.2
SSB-202ENST00000409333 BORCS7-ASMTA0A0B4J1R7 106 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 NDUFB8O95169 186 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.31
SSB-202ENST00000409333 AKR1C1Q04828 323 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 TREML4Q6UXN2 200 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 ZNF329Q86UD4 541 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 STOML3Q8TAV4 291 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 CACNG8Q8WXS5 425 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 ACY3Q96HD9 319 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 S4R3C0 116 aa13.15□□□□□ -0.31
SSB-202ENST00000409333 TRBV9A0A0B4J1U6 114 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 CYB5BO43169 146 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 TSPAN9O75954 239 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 CFDP00746 253 aaPredicted RBP13.14□□□□□ -0.31
SSB-202ENST00000409333 CRYBA1P05813 215 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 RHOGP84095 191 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 RUNX1Q01196 453 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 KLK9Q2XQG4 91 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 HSD17B11Q8NBQ5 300 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 WDR61Q9GZS3 305 aaKnown RBP13.14□□□□□ -0.31
SSB-202ENST00000409333 FBXL7Q9UJT9 491 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 KLK9Q9UKQ9 250 aa13.14□□□□□ -0.31
SSB-202ENST00000409333 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms