RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RAB9AP51151 201 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 OR4X2Q8NGF9 303 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 ZNF580Q9UK33 172 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 HSPB11Q9Y547 144 aa10.98□□□□□ -0.65
CHRNA1-204ENST00000409323 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 MFSD2BA6NFX1 497 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 C15orf62A8K5M9 175 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 L7N2F9 121 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 CXCL2P19875 107 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 NPY1RP25929 384 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 RIPPLY3P57055 190 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 VAMP2P63027 116 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 FOXE3Q13461 319 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 HSD17B13Q7Z5P4 300 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 MRPL41Q8IXM3 137 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 MBD2Q9UBB5 411 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 TNFSF18Q9UNG2 199 aa10.97□□□□□ -0.65
CHRNA1-204ENST00000409323 A0A1B0GUS0 222 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 FAM24AA6NFZ4 105 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 DEDDO75618 318 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 HTR2BP41595 481 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 CAV2P51636 162 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 ZNF345Q14585 488 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 C15orf32Q32M92 178 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 NSUN5P1Q3KNT7 163 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 OR1P1Q8NH06 330 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 C11orf1Q9H5F2 150 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 SLA2Q9H6Q3 261 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 GNB4Q9HAV0 340 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 ZC4H2Q9NQZ6 224 aa10.96□□□□□ -0.65
CHRNA1-204ENST00000409323 INS-IGF2F8WCM5 200 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 IFNA4P05014 189 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 ELANEP08246 267 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 METTL15P1P0C7V9 234 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 KIAA0141Q14154 515 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 DEFB136Q30KP8 78 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 BSXQ3C1V8 233 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 OR8G2PQ6IF36 304 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 ZNF546Q86UE3 836 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 ZNF114Q8NC26 417 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 CIB3Q96Q77 187 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 RAB40CQ96S21 281 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 ZFP57Q9NU63 452 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
CHRNA1-204ENST00000409323 TRBV9A0A0B4J1U6 114 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 ANKRD34BA5PLL1 514 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 OR8U8P0C7N1 319 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 OPRK1P41145 380 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 OR2F1Q13607 317 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 C2orf83Q53S99 150 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 PRSS54Q6PEW0 395 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 UBAC2Q8NBM4 344 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 THAP6Q8TBB0 222 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 FNDC4Q9H6D8 234 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 STRAPQ9Y3F4 350 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 U3KQ87 197 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 A0A0D9SG52 128 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 IGSF23A1L1A6 192 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 K7EIM0 57 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 CST7O76096 145 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 MT-CO2P00403 227 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 C4BPBP20851 252 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 RPL23AP62750 156 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 ETV3LQ6ZN32 361 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 ACOT7LQ6ZUV0 252 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 ZNF491Q8N8L2 437 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 KLHL30-AS1Q8NEE0 82 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 DCUN1D4Q92564 292 aa10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-204ENST00000409323 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 RNF222A6NCQ9 220 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 I3L2K1 104 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 RLN2P04090 185 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 PET100P0DJ07 73 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 PVALBP20472 110 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 S100A11P31949 105 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 ATP5G2Q06055 141 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 ARL16Q0P5N6 197 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 EXOSC2Q13868 293 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 C8orf86Q6ZUL3 223 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 HAPLN4Q86UW8 402 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 COMMD1Q8N668 190 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 NECAP1Q8NC96 275 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 SCARB1Q8WTV0 552 aa10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 BSCL2Q96G97 398 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-204ENST00000409323 MFFQ9GZY8 342 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms