RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 RCN1Q15293 331 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 PLAC9Q5JTB6 97 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 HES5Q5TA89 166 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 LILRB2Q8N423 598 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 TCTEX1D2Q8WW35 142 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 HSD17B10Q99714 261 aaKnown RBP6.53□□□□□ -1.36
NUP43-204ENST00000403890 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 COMMD5Q9GZQ3 224 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 VSIRQ9H7M9 311 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 HRASLSQ9HDD0 168 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 BET1LQ9NYM9 111 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 DKK2Q9UBU2 259 aa6.53□□□□□ -1.36
NUP43-204ENST00000403890 RBMX2Q9Y388 322 aaKnown RBP6.53□□□□□ -1.36
NUP43-204ENST00000403890 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 RGS10O43665 173 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 MYL9P24844 172 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 BRWD1-AS2P59051 145 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 MLLT11Q13015 90 aaPredicted RBP6.52□□□□□ -1.37
NUP43-204ENST00000403890 OXA1LQ15070 435 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 TIMM50Q3ZCQ8 353 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 FAM222AQ5U5X8 452 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 LAIR2Q6ISS4 152 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 TMEM91Q6ZNR0 172 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 OR10W1Q8NGF6 305 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 MAFIPQ8WZ33 124 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 NEU1Q99519 415 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 QTRT1Q9BXR0 403 aaKnown RBP6.52□□□□□ -1.37
NUP43-204ENST00000403890 ATG5Q9H1Y0 275 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 XCL2Q9UBD3 114 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 SPATA2Q9UM82 520 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 OR2W1Q9Y3N9 320 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
NUP43-204ENST00000403890 K7EIM0 57 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 K7EQG2 157 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 APOHP02749 345 aaPredicted RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 DTYMKP23919 212 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 CCL18P55774 89 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 RPS25P62851 125 aaKnown RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 CDNFQ49AH0 187 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 OGFRL1Q5TC84 451 aaPredicted RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 Q6ZS49 121 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 HSD17B13Q7Z5P4 300 aaPredicted RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 MGLLQ99685 303 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 DCSTAMPQ9H295 470 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 KCNK7Q9Y2U2 307 aa6.51□□□□□ -1.37
NUP43-204ENST00000403890 LSM2Q9Y333 95 aaKnown RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 F11RQ9Y624 299 aaKnown RBP6.51□□□□□ -1.37
NUP43-204ENST00000403890 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 TRAV3A0A0B4J244 114 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 UPK2O00526 184 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 CASQ2O14958 399 aaPredicted RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 SCGNO76038 276 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 HLA-DQB1P01920 261 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 SMR3BP02814 79 aaPredicted RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 TRAPPC2P0DI81 140 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 TRAPPC2BP0DI82 140 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 RAB3BP20337 219 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 FGF9P31371 208 aaPredicted RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 FABP5Q01469 135 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 THOC7Q6I9Y2 204 aaKnown RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 CNIH2Q6PI25 160 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 ZNF773Q6PK81 442 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 GSG1LQ6UXU4 331 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 ZNF705AQ6ZN79 300 aaPredicted RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 STXBP6Q8NFX7 210 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 RAB40CQ96S21 281 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 GFI1Q99684 422 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 NXF2Q9GZY0 626 aaKnown RBP6.5□□□□□ -1.37
NUP43-204ENST00000403890 TMEM231Q9H6L2 316 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 RFNGQ9Y644 331 aa6.5□□□□□ -1.37
NUP43-204ENST00000403890 IFITM5A6NNB3 132 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 ZNF705FA8MVS1 300 aaPredicted RBP6.49□□□□□ -1.37
NUP43-204ENST00000403890 MFNGO00587 321 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 FGF2P09038 288 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 ZNF705DP0CH99 300 aaPredicted RBP6.49□□□□□ -1.37
NUP43-204ENST00000403890 ZNF705BP0CI00 300 aaPredicted RBP6.49□□□□□ -1.37
NUP43-204ENST00000403890 NFYAP23511 347 aaPredicted RBP6.49□□□□□ -1.37
NUP43-204ENST00000403890 MFAP4P55083 255 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 GNG2P59768 71 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 ARPC4P59998 168 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 DLK1P80370 383 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
NUP43-204ENST00000403890 TTC32Q5I0X7 151 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 Q6ZSN1 163 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 ZBTB34Q8NCN2 500 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 TXN2Q99757 166 aa6.49□□□□□ -1.37
NUP43-204ENST00000403890 DUSP21Q9H596 190 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms