RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCL28Q9NRJ3 127 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 THBDP07204 575 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 IGFBP2P18065 325 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 FOXF1Q12946 379 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 GNLYP22749 145 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 FOXA3P55318 350 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 IGKV1D-42A0A075B6H8 117 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 TRGV3P03979 118 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 PDE6HQ13956 83 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 C1QTNF4Q9BXJ3 329 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 IGF2P01344 180 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 DDX60Q8IY21 1712 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-220ENST00000399655 FER1L4A9Z1Z3 1794 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 FAM208AQ9UK61 1670 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 RGPD3A6NKT7 1758 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 VCYO14598 125 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 IGHV3-13P01766 116 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 IGHV3-7P01780 117 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 PRB4P10163 310 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 KIR3DS1Q14943 382 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 HCP5Q6MZN7 132 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 UBE2CO00762 179 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 PTGDSP41222 190 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 SPXQ9BT56 116 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 CLEC7AQ9BXN2 247 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 FOXD3Q9UJU5 478 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 NBEAP1P0C6P0 100 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 ACER2Q5QJU3 275 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 MDS2Q8NDY4 140 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 ACANP16112 2415 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 CT55Q8WUE5 264 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 FOXH1O75593 365 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 STPG4Q8N801 248 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 C17orf77Q96MU5 243 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 ATAD5Q96QE3 1844 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 IGHV3-21A0A0B4J1V1 117 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 PFN3P60673 137 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 DUX4L9Q6RFH8 374 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 PNLIPP16233 465 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
CACNA1C-220ENST00000399655 COL1A1P02452 1464 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 UCP1P25874 307 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 ZNF750Q32MQ0 723 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 ICAM4Q14773 271 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 DAD1P61803 113 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 CD300LDQ6UXZ3 194 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 TMEFF1Q8IYR6 380 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 FOCADQ5VW36 1801 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 GATA2P23769 480 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 LY6G5BQ8NDX9 201 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 H0YL77 283 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 C16orf97H3BN30 126 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 TEX45Q8NA69 505 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 NWD2Q9ULI1 1742 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 TOGARAM1Q9Y4F4 1720 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 NPIPB13A6NJU9 1138 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 C17orf99Q6UX52 265 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 IGLV3-22A0A075B6J6 115 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 SIGLEC15Q6ZMC9 328 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 ADGRB2O60241 1585 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 IQCF3P0C7M6 154 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 UCNP55089 124 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 C1QTNF12Q5T7M4 302 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 FGFBP2Q9BYJ0 223 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 TCTN3Q6NUS6 607 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 CYP2G1PQ6ZSU1 146 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 PLAC1Q9HBJ0 212 aa7.31□□□□□ -1.24
CACNA1C-220ENST00000399655 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 CXCL10P02778 98 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 VSIRQ9H7M9 311 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 KCNE3Q9Y6H6 103 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 RFLNAQ6ZTI6 216 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 RND3P61587 244 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 BCL9LQ86UU0 1499 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 DPTQ07507 201 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 VN1R2Q8NFZ6 395 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 CGB7P0DN87 165 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 TM4SF1P30408 202 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 ZFP64Q9NPA5 681 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 SLX1AQ9BQ83 275 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 M0QZQ0 153 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 COL9A1P20849 921 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 ZNF721Q8TF20 911 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 EMDP50402 254 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 SERF1AO75920 110 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 A0A0U1RQV5 110 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 RHODO00212 210 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 TAL2Q16559 108 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 RPRMLQ8N4K4 120 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 ZPLD1Q8TCW7 415 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 MBNL3Q9NUK0 354 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms