RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 HIST2H3AQ71DI3 136 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNRF2Q8NHG8 242 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 PIK3IP1Q96FE7 263 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 SUCNR1Q9BXA5 334 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 DOK5Q9P104 306 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 A8MXK9 166 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 SOX15O60248 233 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 PFN1P07737 140 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 FGF2P09038 288 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 UBBP0CG47 229 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF708P17019 499 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 FABP6P51161 128 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 LINC00205P59089 165 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF239Q16600 458 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 LTC4SQ16873 150 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 TFAP2EQ6VUC0 442 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 OR10G4Q8NGN3 311 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 RTN4IP1Q8WWV3 396 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 TMEM54Q969K7 222 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 CYTL1Q9NRR1 136 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGLV3-32A0A0A0MS00 114 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGKV1D-13A0A0B4J2D9 117 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 LYZL6O75951 148 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 FCGR3AP08637 254 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 OR5AL1P0C617 328 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGKV1-13P0DP09 117 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 CA6P23280 308 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 COL8A2P25067 703 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 RAB5BP61020 215 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 UBA52P62987 128 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 OCIAD2Q56VL3 154 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 BAP18Q8IXM2 172 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 PHLDA1Q8WV24 401 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 PTX4Q96A99 478 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 TP53RKQ96S44 253 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 C7orf69Q9H7B7 122 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 ANXA10Q9UJ72 324 aa5.02□□□□□ -1.61
TRAPPC13-202ENST00000399438 SPAARA0A1B0GVQ0 90 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ETV2O00321 342 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF728P0DKX0 622 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CT45A6P0DMU7 189 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CT45A5P0DMU8 189 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CT45A7P0DMV0 189 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CRYGSP22914 178 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 AGTR1P30556 359 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CT45A1Q5HYN5 189 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM27BQ5VT28 67 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FBXW12Q6X9E4 464 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 MAPKAPK5-AS1Q8N8E1 139 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZDHHC22Q8N966 263 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 DEFB124Q8NES8 71 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CT45A3Q8NHU0 189 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ARPC1AQ92747 370 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 EEF1AKMT3Q96AZ1 226 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 A0A0D9SG52 128 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 NKX2-6A6NCS4 301 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM24AA6NFZ4 105 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 K7EPK0 472 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 K7ERU9 68 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 HMGB3O15347 200 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 GFRA3O60609 400 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CRLF1O75462 422 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 PRH1P02810 166 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CFPP27918 469 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 SAA4P35542 130 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 PRDX4Q13162 271 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 SPINK9Q5DT21 86 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGFL2Q6UWQ7 119 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM71E2Q8N5Q1 922 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 CNEP1R1Q8N9A8 125 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF439Q8NDP4 499 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 RPUSD4Q96CM3 377 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 TTTY12Q9BZ98 90 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 MOB1AQ9H8S9 216 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZDHHC11Q9H8X9 412 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 DNASE2O00115 360 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 SSSCA1O60232 199 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 DAZAP2Q15038 168 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 C10orf128Q5T292 105 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 HES3Q5TGS1 186 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF826PQ6ZT77 177 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 SGPP2Q8IWX5 399 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 SLC30A7Q8NEW0 376 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 TAF9BQ9HBM6 251 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FBXO7Q9Y3I1 522 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 V9GYS6 101 aa5.01□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM240AA0A1B0GVK7 77 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 NCBP2LA6PVI3 153 aaKnown RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 GGCTO75223 188 aaKnown RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 HKR1P10072 659 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 TPT1P13693 172 aaKnown RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 CCL1P22362 96 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 APLNRP35414 380 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 TDGF1P3P51864 188 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 PKIAP61925 76 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 SLC35G3Q8N808 338 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms