RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
SMAD9-203ENST00000399275 LHFPL6Q9Y693 200 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 CCDC88CQ9P219 2028 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 FAM27BQ5VT28 67 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 PATJQ8NI35 1801 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 TEX48A0A1B0GUV7 120 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 FGF12P61328 243 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 RHOGP84095 191 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 OR51G1Q8NGK1 321 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 ATP23Q9Y6H3 246 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 CEACAM18A8MTB9 384 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 SRD5A2P31213 254 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 OSTCQ9NRP0 149 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 ANK1P16157 1881 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 CACNA1DQ01668 2161 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 SPINT1O43278 529 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 IL11P20809 199 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 NXPH1P58417 271 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 UTF1Q5T230 341 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 LYPD6BQ8NI32 183 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 FGF11Q92914 225 aa8.11□□□□□ -1.11
SMAD9-203ENST00000399275 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
SMAD9-203ENST00000399275 PSME4Q14997 1843 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 PEX7O00628 323 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
SMAD9-203ENST00000399275 VEGFBP49765 207 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 LYL1P12980 280 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 C10orf91Q5T1B1 145 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 RAX2Q96IS3 184 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 C18orf12Q96KH6 178 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 MRPL32Q9BYC8 188 aaKnown RBP8.1□□□□□ -1.11
SMAD9-203ENST00000399275 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 H3BMG7 143 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 J3QT63 122 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 NAPSAO96009 420 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 CDKN1AP38936 164 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 VGLL1Q99990 258 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 SFXN3Q9BWM7 321 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 IGHV1OR21-1A0A087WYE8 117 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 IGHV3-13P01766 116 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 IGHV3-7P01780 117 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 OR5P3Q8WZ94 311 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 MRPL27Q9P0M9 148 aaKnown RBP8.1□□□□□ -1.11
SMAD9-203ENST00000399275 LOC285556D6RIA3 1793 aa8.1□□□□□ -1.11
SMAD9-203ENST00000399275 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 PTCRAQ6ISU1 281 aaPredicted RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 C16orf47Q6ZP98 133 aaPredicted RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 SLC25A10Q9UBX3 287 aaPredicted RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 LCTP09848 1927 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 CELA2BP08218 269 aaPredicted RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 COL9A1P20849 921 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 ASIPP42127 132 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 CCL20P78556 96 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 TMEM240Q5SV17 173 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 STPG3Q8N7X2 389 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 PRRC2BQ5JSZ5 2229 aaKnown RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 TOMM40O96008 361 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 SIVA1O15304 175 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 SCTP09683 121 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 SPEM2Q0P670 501 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 FAM90A2PQ658T7 463 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 LCNL1Q6ZST4 164 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 C3orf56Q8N813 242 aa8.09□□□□□ -1.11
SMAD9-203ENST00000399275 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
SMAD9-203ENST00000399275 PDE4DIPQ5VU43 2346 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 CGAP01215 116 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 PATE4P0C8F1 98 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 SPATA46Q5T0L3 261 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 NPIPB3Q92617 1050 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 CLEC7AQ9BXN2 247 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 ASCC3Q8N3C0 2202 aaKnown RBP8.08□□□□□ -1.12
SMAD9-203ENST00000399275 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 AHRRA9YTQ3 701 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 PRR32B1ATL7 298 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 MMP23AO75900 390 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF818PQ6ZRF7 136 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 FGFRL1Q8N441 504 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 DRAM1Q8N682 238 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
SMAD9-203ENST00000399275 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 H7C1H1 209 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
SMAD9-203ENST00000399275 GATAD1Q8WUU5 269 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 EEF1AKMT3Q96AZ1 226 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 RNF125Q96EQ8 232 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 EAF1Q96JC9 268 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms