RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CTSGP08311 255 aa12.61□□□□□ -0.39
APTR-201ENST00000398043 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
APTR-201ENST00000398043 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
APTR-201ENST00000398043 SPSB3Q6PJ21 355 aa12.61□□□□□ -0.39
APTR-201ENST00000398043 SLC35G3Q8N808 338 aa12.61□□□□□ -0.39
APTR-201ENST00000398043 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
APTR-201ENST00000398043 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
APTR-201ENST00000398043 A8MZ25 164 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 IFNA17P01571 189 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 AKR1C4P17516 323 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 TM4SF20Q53R12 229 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 MISP3Q96FF7 219 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
APTR-201ENST00000398043 C19orf73Q9NVV2 129 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
APTR-201ENST00000398043 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 MLXQ9UH92 298 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
APTR-201ENST00000398043 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 ZNF320A2RRD8 509 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 MT-CO2P00403 227 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
APTR-201ENST00000398043 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
APTR-201ENST00000398043 SPCS3P61009 180 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
APTR-201ENST00000398043 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 TXN2Q99757 166 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 SLC25A21Q9BQT8 299 aaPredicted RBP12.59□□□□□ -0.39
APTR-201ENST00000398043 STAB2Q8WWQ8 2551 aa12.59□□□□□ -0.39
APTR-201ENST00000398043 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 NDUFA4O00483 81 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 IGHV4-30-4P0DP06 118 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 TMEM128Q5BJH2 165 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 PDCD10Q9BUL8 212 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
APTR-201ENST00000398043 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 MFAP4P55083 255 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 DYNLRB2Q8TF09 96 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 ASCL2Q99929 193 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
APTR-201ENST00000398043 PALMDQ9NP74 551 aa12.57□□□□□ -0.4
APTR-201ENST00000398043 GAR1Q9NY12 217 aaKnown RBP12.57□□□□□ -0.4
APTR-201ENST00000398043 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
APTR-201ENST00000398043 BTCP35070 178 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 SNCAP37840 140 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
APTR-201ENST00000398043 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 Q56UQ5 140 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 ZNF57Q68EA5 555 aaPredicted RBP12.56□□□□□ -0.4
APTR-201ENST00000398043 TMED4Q7Z7H5 227 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 TMEM61Q8N0U2 210 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 LGI3Q8N145 548 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
APTR-201ENST00000398043 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
APTR-201ENST00000398043 UFC1Q9Y3C8 167 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
APTR-201ENST00000398043 K7EMT4 169 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 SULT1A3P0DMM9 295 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 SULT1A4P0DMN0 295 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 CCR6P51684 374 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 SRPXP78539 464 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
APTR-201ENST00000398043 MLANAQ16655 118 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 OR10C1Q96KK4 312 aa12.55□□□□□ -0.4
APTR-201ENST00000398043 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
APTR-201ENST00000398043 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
APTR-201ENST00000398043 DUXBA0A1W2PPF3 345 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 NAP1L6A6NFF2 107 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 C15orf62A8K5M9 175 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 CORTO00230 105 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 PITX3O75364 302 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 NDUFB6O95139 128 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 SFT2D2O95562 160 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 CD7P09564 240 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 ANXA3P12429 323 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 IL7P13232 177 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 SUB1P53999 127 aaKnown RBP eCLIP12.54□□□□□ -0.4
APTR-201ENST00000398043 PPP1R1AQ13522 171 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 SMCO1Q147U7 214 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 C2orf83Q53S99 150 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 ENY2Q9NPA8 101 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
APTR-201ENST00000398043 A6NHS1 94 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
APTR-201ENST00000398043 TMEM50AO95807 157 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 HTR2BP41595 481 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 TRIQKQ629K1 86 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 LINC00322Q6ZN03 302 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms