RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 UCNP55089 124 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 SPANXN1Q5VSR9 72 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 MFAP4P55083 255 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 MST1LQ2TV78 715 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 MRPL20Q9BYC9 149 aaKnown RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 LIME1Q9H400 295 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 IL36BQ9NZH7 164 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 DENND4CQ5VZ89 1909 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 CKS2P33552 79 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 HINT1P49773 126 aaPredicted RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 HERPUD1Q15011 391 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 UBTD1Q9HAC8 227 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 SAA2-SAA4A0A096LPE2 208 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 SAA2P0DJI9 122 aaPredicted RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 C20orf204Q6ZNR8 217 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 MRPL37Q9BZE1 423 aaKnown RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 AP5S1Q9NUS5 200 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 LINC00312Q9Y6C7 94 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 PCDH15Q96QU1 1955 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 B9A039 149 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 UBE2CO00762 179 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
SOCS6-201ENST00000397942 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
SOCS6-201ENST00000397942 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 RABAC1Q9UI14 185 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 AUP1Q9Y679 476 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 TMEM189A5PLL7 270 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 OR9G9P0C7N8 305 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 PLXNA4Q9HCM2 1894 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 SAA1P0DJI8 122 aaPredicted RBP10.35□□□□□ -0.75
SOCS6-201ENST00000397942 TCTAP57738 103 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 LINC00205P59089 165 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 DNAH12Q6ZR08 3092 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 IGKV1-6A0A0C4DH72 117 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 A0A1B0GV90 55 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 LYL1P12980 280 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 BMI1P35226 326 aa10.35□□□□□ -0.75
SOCS6-201ENST00000397942 RPUSD1Q9UJJ7 312 aaKnown RBP10.35□□□□□ -0.75
SOCS6-201ENST00000397942 TRBV9A0A0B4J1U6 114 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 WIPF3A6NGB9 483 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 CEACAM1P13688 526 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 BSPH1Q075Z2 132 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 OR5R1Q8NH85 324 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 DMRTA2Q96SC8 542 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 PCNX3Q9H6A9 2034 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 UPK2O00526 184 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 EFNB3Q15768 340 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 SPATA45Q537H7 98 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 C15orf61A6NNL5 157 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 FOLR2P14207 255 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 CDC42EP3Q9UKI2 254 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 Q6ZS49 121 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 APOBEC3AP31941 199 aaPredicted RBP10.34□□□□□ -0.75
SOCS6-201ENST00000397942 CD69Q07108 199 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 GPR82Q96P67 336 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 TMEM208Q9BTX3 173 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 METRNQ9UJH8 293 aa10.34□□□□□ -0.75
SOCS6-201ENST00000397942 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 CGB1A6NKQ9 187 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TCF23Q7RTU1 214 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 RNASE7Q9H1E1 156 aaKnown RBP10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TCF21O43680 179 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 FAM106CPP0CH98 169 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 NTF4P34130 210 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TAS2R60P59551 318 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 S4R3C0 116 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TRBV6-6A0A0A6YYG2 114 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 PEX7O00628 323 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 SERF1AO75920 110 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 AMY1AP04745 511 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 HTN1P15515 57 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TMEM170AQ8WVE7 144 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 DPF1Q92782 380 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 WNT10AQ9GZT5 417 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 PROK2Q9HC23 129 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
SOCS6-201ENST00000397942 ARHGAP21Q5T5U3 1957 aa10.33□□□□□ -0.76
SOCS6-201ENST00000397942 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms