RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 PRAF2O60831 178 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 IGKV1-39P01597 117 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 IGKV1D-39P04432 117 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
CUX2-202ENST00000397643 G6PCP35575 357 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 AKR1C2P52895 323 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
CUX2-202ENST00000397643 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 CADM3Q8N126 398 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 OR4A5Q8NH83 315 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 RNASE11Q8TAA1 199 aaKnown RBP12.02□□□□□ -0.49
CUX2-202ENST00000397643 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 RRNAD1Q96FB5 475 aaKnown RBP12.02□□□□□ -0.49
CUX2-202ENST00000397643 OR2A7Q96R45 310 aa12.02□□□□□ -0.49
CUX2-202ENST00000397643 LGALS9O00182 355 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 DEDDO75618 318 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 TNXAQ16473 311 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 H2BFWTQ7Z2G1 175 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 PUSL1Q8N0Z8 303 aaKnown RBP12.01□□□□□ -0.49
CUX2-202ENST00000397643 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
CUX2-202ENST00000397643 SEC22AQ96IW7 307 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 TMEM140Q9NV12 185 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 BET1LQ9NYM9 111 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 PRR13Q9NZ81 148 aa12.01□□□□□ -0.49
CUX2-202ENST00000397643 LOC102724200A0A096LPH7 203 aaPredicted RBP12□□□□□ -0.49
CUX2-202ENST00000397643 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
CUX2-202ENST00000397643 TMEM213A2RRL7 107 aa12□□□□□ -0.49
CUX2-202ENST00000397643 SNAPC5O75971 98 aa12□□□□□ -0.49
CUX2-202ENST00000397643 KBTBD11O94819 623 aa12□□□□□ -0.49
CUX2-202ENST00000397643 OXA1LQ15070 435 aa12□□□□□ -0.49
CUX2-202ENST00000397643 C15orf32Q32M92 178 aa12□□□□□ -0.49
CUX2-202ENST00000397643 ANKRD55Q3KP44 614 aa12□□□□□ -0.49
CUX2-202ENST00000397643 FAM219AQ8IW50 185 aa12□□□□□ -0.49
CUX2-202ENST00000397643 MMD2Q8IY49 270 aa12□□□□□ -0.49
CUX2-202ENST00000397643 LRTM2Q8N967 370 aa12□□□□□ -0.49
CUX2-202ENST00000397643 NECAP1Q8NC96 275 aa12□□□□□ -0.49
CUX2-202ENST00000397643 OR52B4Q8NGK2 314 aa12□□□□□ -0.49
CUX2-202ENST00000397643 LHFPL5Q8TAF8 219 aa12□□□□□ -0.49
CUX2-202ENST00000397643 TMEM167AQ8TBQ9 72 aa12□□□□□ -0.49
CUX2-202ENST00000397643 SEC22CQ9BRL7 303 aa12□□□□□ -0.49
CUX2-202ENST00000397643 MLXQ9UH92 298 aa12□□□□□ -0.49
CUX2-202ENST00000397643 A0A0B4J2A0 478 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 UPK2O00526 184 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 OR2J3O76001 311 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 ACTL6BO94805 426 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 OR2C1O95371 312 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 CBLN1P23435 193 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 TTC9CQ8N5M4 171 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 SLC35G3Q8N808 338 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 LSM10Q969L4 123 aaKnown RBP11.99□□□□□ -0.49
CUX2-202ENST00000397643 ZNF430Q9H8G1 570 aaPredicted RBP11.99□□□□□ -0.49
CUX2-202ENST00000397643 SHPKQ9UHJ6 478 aa11.99□□□□□ -0.49
CUX2-202ENST00000397643 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 A8MWP6 167 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
CUX2-202ENST00000397643 IL6RP08887 468 aaPredicted RBP11.98□□□□□ -0.49
CUX2-202ENST00000397643 ATF4P18848 351 aaPredicted RBP11.98□□□□□ -0.49
CUX2-202ENST00000397643 MAS1LP35410 378 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 RPL8P62917 257 aaKnown RBP11.98□□□□□ -0.49
CUX2-202ENST00000397643 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 LYZL2Q7Z4W2 148 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 GPHB5Q86YW7 130 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 C12orf45Q8N5I9 185 aaPredicted RBP11.98□□□□□ -0.49
CUX2-202ENST00000397643 OR4A16Q8NH70 328 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 TMED3Q9Y3Q3 217 aa11.98□□□□□ -0.49
CUX2-202ENST00000397643 NDUFB8O95169 186 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 IFNA21P01568 189 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 FGF2P09038 288 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 HLA-GP17693 338 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
CUX2-202ENST00000397643 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.49
CUX2-202ENST00000397643 HOXB5P09067 269 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 P0C879 139 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 BMI1P35226 326 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 LGALS9CQ6DKI2 356 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 Q6ZWC4 215 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 GPR146Q96CH1 333 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 COMMD5Q9GZQ3 224 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 KLK5Q9Y337 293 aaPredicted RBP11.96□□□□□ -0.49
CUX2-202ENST00000397643 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.49
CUX2-202ENST00000397643 A0A0G2JRQ6 117 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 SPRY2O43597 315 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms