RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TNXAQ16473 311 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 C5orf64Q2M2E5 130 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 C9orf66Q5T8R8 295 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 NOXA1Q86UR1 476 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 MYOZ3Q8TDC0 251 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 DCUN1D4Q92564 292 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 CIB3Q96Q77 187 aaPredicted RBP8□□□□□ -1.13
NEDD8-202ENST00000396828 OR5B12Q96R08 314 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 RAB40CQ96S21 281 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 MAGT1Q9H0U3 335 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 HIPK2Q9H2X6 1198 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 RBKSQ9H477 322 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 MBD2Q9UBB5 411 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 RCL1Q9Y2P8 373 aaKnown RBP8□□□□□ -1.13
NEDD8-202ENST00000396828 TEX50A0A1B0GTY4 177 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 HMSDA8MTL9 139 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 CNIH1O95406 144 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 NHLRC4P0CG21 123 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-202ENST00000396828 HOXA1P49639 335 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-202ENST00000396828 EIF2B2P49770 351 aaKnown RBP7.99□□□□□ -1.13
NEDD8-202ENST00000396828 RPP30P78346 268 aaKnown RBP7.99□□□□□ -1.13
NEDD8-202ENST00000396828 Q5BKY6 102 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 TMEM65Q6PI78 240 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF546Q86UE3 836 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF491Q8N8L2 437 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 INO80EQ8NBZ0 244 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-202ENST00000396828 OR1L8Q8NGR8 309 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 DTD1Q8TEA8 209 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 C4orf3Q8WVX3 66 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 HINT2Q9BX68 163 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 GON7Q9BXV9 100 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 PLEKHA3Q9HB20 300 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 TPSG1Q9NRR2 321 aa7.99□□□□□ -1.13
NEDD8-202ENST00000396828 SORL1Q92673 2214 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 EPPK1P58107 5090 aaKnown RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 A0A1W2PN81 502 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 G3V3Q6 166 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 BOLA2-SMG1P6H3BVE0 249 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 I3L521 148 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 ATP6V0E1O15342 81 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 ARPC5O15511 151 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 CA2P00918 260 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 LYL1P12980 280 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 CHRNA7P36544 502 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 RPL27AP46776 148 aaKnown RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 P2RY1P47900 373 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 CAV2P51636 162 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 TAS2R30P59541 319 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 PRCDQ00LT1 54 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 PJVKQ0ZLH3 352 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 HSD17B13Q7Z5P4 300 aaPredicted RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 OR1N2Q8NGR9 330 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 SMIM8Q96KF7 97 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 RNF126Q9BV68 326 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 ZC4H2Q9NQZ6 224 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 GAR1Q9NY12 217 aaKnown RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 PSENENQ9NZ42 101 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 OR5AC2Q9NZP5 309 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF256Q9Y2P7 627 aaPredicted RBP7.98□□□□□ -1.13
NEDD8-202ENST00000396828 FBXO7Q9Y3I1 522 aa7.98□□□□□ -1.13
NEDD8-202ENST00000396828 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 H0YIZ8 118 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 FCN1O00602 326 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 SOX15O60248 233 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 TSC22D2O75157 780 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 HLA-DRB1P01911 266 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 IAPPP10997 89 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
NEDD8-202ENST00000396828 NDPQ00604 133 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 FXYD3Q14802 87 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 SPINK9Q5DT21 86 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF562Q6V9R5 426 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 OR2C3Q8N628 320 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 OR11H4Q8NGC9 324 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 MFFQ9GZY8 342 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 SLC25A31Q9H0C2 315 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 PARP11Q9NR21 331 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 LYRM2Q9NU23 88 aaPredicted RBP7.97□□□□□ -1.13
NEDD8-202ENST00000396828 ZMAT5Q9UDW3 170 aaKnown RBP7.97□□□□□ -1.13
NEDD8-202ENST00000396828 TNFSF18Q9UNG2 199 aa7.97□□□□□ -1.13
NEDD8-202ENST00000396828 INS-IGF2F8WCM5 200 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SCAF4O95104 1147 aaKnown RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 IFNA10P01566 189 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 MYOD1P15172 320 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 C4BPBP20851 252 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 RPL12P30050 165 aaKnown RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SNCAP37840 140 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 RAB9AP51151 201 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SUB1P53999 127 aaKnown RBP eCLIP7.96□□□□□ -1.146e-8■■■■□ 23
NEDD8-202ENST00000396828 SLURP1P55000 103 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 ATP5IP56385 69 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 MRGPRG-AS1Q2M3A8 158 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 C19orf54Q5BKX5 351 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SPANXN5Q5MJ07 72 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 ACOT7LQ6ZUV0 252 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms