RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
RPUSD3-201ENST00000383820 VSIRQ9H7M9 311 aa13.1□□□□□ -0.31
RPUSD3-201ENST00000383820 IGKV3-7A0A075B6H7 116 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 HRH1P35367 487 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 HSPE1P61604 102 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 ERHP84090 104 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 PHLDA2Q53GA4 152 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 LYSMD2Q8IV50 215 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 SAMD12Q8N8I0 201 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 FBXL17Q9UF56 701 aa13.09□□□□□ -0.31
RPUSD3-201ENST00000383820 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 NPBWR1P48145 328 aa13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 TMEM187Q14656 261 aa13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 GBGT1Q8N5D6 347 aa13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 HERC2O95714 4834 aa13.08□□□□□ -0.32
RPUSD3-201ENST00000383820 IGHV3OR16-13A0A075B7E8 117 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 IGHV3-74A0A0B4J1X5 117 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 UCP3P55916 312 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 TSPAN5P62079 268 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 PINX1Q96BK5 328 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-201ENST00000383820 DNAH10Q8IVF4 4471 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 ST8SIA3O43173 380 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 TGFBR1P36897 503 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 RPS19P39019 145 aaKnown RBP13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 ST8SIA2Q92186 375 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 MS4A6AQ9H2W1 248 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 HRH4Q9H3N8 390 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
RPUSD3-201ENST00000383820 C11orf94C9JXX5 98 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 INS-IGF2F8WCM5 200 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 IGHV3-48P01763 117 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 DEFB131AP59861 70 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 MRGPRFQ96AM1 343 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 SCPEP1Q9HB40 452 aa13.05□□□□□ -0.32
RPUSD3-201ENST00000383820 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-201ENST00000383820 SNCAP37840 140 aa13.04□□□□□ -0.32
RPUSD3-201ENST00000383820 PVRIGQ6DKI7 326 aa13.04□□□□□ -0.32
RPUSD3-201ENST00000383820 LILRB2Q8N423 598 aa13.04□□□□□ -0.32
RPUSD3-201ENST00000383820 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPUSD3-201ENST00000383820 A0A1W2PS18 150 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 CORTO00230 105 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 TMEM50AO95807 157 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 RCVRNP35243 200 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 RPL11P62913 178 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 PRR20EP86478 221 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 PRR20CP86479 221 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 PRR20DP86480 221 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 PRR20BP86481 221 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 PRR20AP86496 221 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 STHQ8IWL8 128 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 Q8NAQ8 132 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 YIPF6Q96EC8 236 aa13.03□□□□□ -0.32
RPUSD3-201ENST00000383820 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 DEFB4AO15263 64 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 NPPCP23582 126 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 RND3P61587 244 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 ZNF486Q96H40 463 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
RPUSD3-201ENST00000383820 A0A1B0GU03 582 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 ATG12O94817 140 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 APOA1P02647 267 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 P0C879 139 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 SPP1P10451 314 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 FAM24BQ8N5W8 94 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 SLC35G3Q8N808 338 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 RABAC1Q9UI14 185 aa13.01□□□□□ -0.33
RPUSD3-201ENST00000383820 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 IGLL5B9A064 214 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 K7EQG2 157 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 SCGB2A1O75556 95 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 MIFP14174 115 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 SPINK9Q5DT21 86 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 METTL26Q96S19 204 aa13□□□□□ -0.33
RPUSD3-201ENST00000383820 VPS13DQ5THJ4 4388 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 A0A0B4J293 547 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 CLN5O75503 358 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 IFNA17P01571 189 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
RPUSD3-201ENST00000383820 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms