RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 G0S2P27469 103 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-203ENST00000378169 MYOD1P15172 320 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 NEUROG1Q92886 237 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 TMEM133Q9H2Q1 129 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 DPRXA6NFQ7 191 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 ELOBQ15370 118 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 GGACTQ9BVM4 153 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 WNK1Q9H4A3 2382 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 PRSS1P07477 247 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 PGLYRP4Q96LB8 373 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 TBX15Q96SF7 602 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 LOC389332A0A1B0GUA5 103 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 BMI1P35226 326 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 TMEM144Q7Z5S9 345 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 REG4Q9BYZ8 158 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 DCAF16Q9NXF7 216 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.665e-8■■■■■ 28.4
NPHP4-203ENST00000378169 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 VAMP3Q15836 100 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
NPHP4-203ENST00000378169 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
NPHP4-203ENST00000378169 BMPR1BO00238 502 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 COX6B1P14854 86 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 COMPP49747 757 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-203ENST00000378169 TCTAP57738 103 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 SRSF12Q8WXF0 261 aaKnown RBP10.91□□□□□ -0.66
NPHP4-203ENST00000378169 SDF2L1Q9HCN8 221 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 WDR83OSQ9Y284 106 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 C19orf24Q9BVV8 132 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 ZNRD1Q9P1U0 126 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 IGHV3-66A0A0C4DH42 116 aa10.91□□□□□ -0.66
NPHP4-203ENST00000378169 ATP5IP56385 69 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-203ENST00000378169 ZNF672Q499Z4 452 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-203ENST00000378169 AMY1AP04745 511 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 SRIP30626 198 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 Q6ZR03 302 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 LHFPL4Q7Z7J7 247 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 PPP1R27Q86WC6 154 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 C16orf92Q96LL3 132 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 FOXH1O75593 365 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 DKK1O94907 266 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
NPHP4-203ENST00000378169 Q6ZN92 141 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 LINC00518Q8N0U6 118 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 IMMP2LQ96T52 175 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 NEU1Q99519 415 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 WNT10AQ9GZT5 417 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 CD5P06127 495 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 C1QTNF9P0C862 333 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 ADIPOQQ15848 244 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 SPANXN1Q5VSR9 72 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 KIR3DL3Q8N743 410 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 NEU4Q8WWR8 484 aaPredicted RBP10.9□□□□□ -0.66
NPHP4-203ENST00000378169 PIMREGQ9BSJ6 248 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 SLC25A33Q9BSK2 321 aa10.9□□□□□ -0.66
NPHP4-203ENST00000378169 CDX1P47902 265 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 DMRTA2Q96SC8 542 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 MT-ND6P03923 174 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 PDLIM4P50479 330 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TREML4Q6UXN2 200 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 CACNG8Q8WXS5 425 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 METTL26Q96S19 204 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM189A5PLL7 270 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TIMM23O14925 209 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 PYYP10082 97 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 OR52E5Q8NH55 327 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 GOLT1BQ9Y3E0 138 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 YTHDF2Q9Y5A9 579 aaKnown RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TNFSF13O75888 250 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 VENTXO95231 258 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 HLA-DQA1P01909 254 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 SRSF4Q08170 494 aaKnown RBP10.89□□□□□ -0.67
NPHP4-203ENST00000378169 CCL19Q99731 98 aa10.89□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM50AO95807 157 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
NPHP4-203ENST00000378169 GPR183P32249 361 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 EFNB3Q15768 340 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms