RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
HDAC6-204ENST00000376643 TBPP20226 339 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 RND3P61587 244 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 LSM3P62310 102 aaKnown RBP10.92□□□□□ -0.66
HDAC6-204ENST00000376643 MZT2AQ6P582 158 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 LYSMD2Q8IV50 215 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 RNF2Q99496 336 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 COMMD3Q9UBI1 195 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 AKR1C2P52895 323 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 RNASE10Q5GAN6 216 aaKnown RBP10.91□□□□□ -0.66
HDAC6-204ENST00000376643 SNX29P2Q8IUI4 249 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 ARRDC1Q8N5I2 433 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 SLC35G3Q8N808 338 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 PINX1Q96BK5 328 aaKnown RBP10.91□□□□□ -0.66
HDAC6-204ENST00000376643 NARS2Q96I59 477 aaKnown RBP10.91□□□□□ -0.66
HDAC6-204ENST00000376643 ENY2Q9NPA8 101 aa10.91□□□□□ -0.66
HDAC6-204ENST00000376643 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 A0A1W2PS18 150 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 DNASE2O00115 360 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-204ENST00000376643 PGAM2P15259 253 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 RORCP51449 518 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 TMEM41BQ5BJD5 291 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 CCDC71LQ8N9Z2 235 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 RARRES2Q99969 163 aa10.9□□□□□ -0.66
HDAC6-204ENST00000376643 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 IFNA17P01571 189 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 IFNA4P05014 189 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 TGFBR1P36897 503 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 TFPI2P48307 235 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 EIF2B2P49770 351 aaKnown RBP10.89□□□□□ -0.67
HDAC6-204ENST00000376643 TCTAP57738 103 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 ZFAND1Q8TCF1 268 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
HDAC6-204ENST00000376643 C11orf68Q9H3H3 251 aaKnown RBP10.89□□□□□ -0.67
HDAC6-204ENST00000376643 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
HDAC6-204ENST00000376643 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 PIGPP57054 158 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 FAM90A2PQ658T7 463 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
HDAC6-204ENST00000376643 PHLDA1Q8WV24 401 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-204ENST00000376643 VSIRQ9H7M9 311 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 BIRC6Q9NR09 4857 aa10.88□□□□□ -0.67
HDAC6-204ENST00000376643 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 RPS10-NUDT3A0A1W2PQS6 291 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 HOXA1P49639 335 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-204ENST00000376643 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
HDAC6-204ENST00000376643 TMEM187Q14656 261 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 TRIM16LQ309B1 348 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 FAM219AQ8IW50 185 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 CENPSQ8N2Z9 138 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 C11orf45Q8TAV5 145 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 GRAMD2BQ96HH9 432 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 METTL26Q96S19 204 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 FUNDC2Q9BWH2 189 aa10.87□□□□□ -0.67
HDAC6-204ENST00000376643 IGKV3-7A0A075B6H7 116 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 C3orf85A0A1B0GTC6 90 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 CA1P00915 261 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-204ENST00000376643 IGKV1-39P01597 117 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 IGKV1D-39P04432 117 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 ELK1P19419 428 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 NPPCP23582 126 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 RPL5P46777 297 aaKnown RBP10.86□□□□□ -0.67
HDAC6-204ENST00000376643 NCS1P62166 190 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 RBMS2Q15434 407 aaKnown RBP10.86□□□□□ -0.67
HDAC6-204ENST00000376643 LGALS9CQ6DKI2 356 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 STHQ8IWL8 128 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 GBGT1Q8N5D6 347 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 OR11H2Q8NH07 326 aa10.86□□□□□ -0.67
HDAC6-204ENST00000376643 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDAC6-204ENST00000376643 M0QYG6 137 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 HPGDSO60760 199 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 OPRK1P41145 380 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 TAS2R19P59542 299 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 VBP1P61758 197 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 SSBP1Q04837 148 aaKnown RBP10.85□□□□□ -0.67
HDAC6-204ENST00000376643 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-204ENST00000376643 LHFPL1Q86WI0 220 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 ST8SIA2Q92186 375 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 MS4A6AQ9H2W1 248 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 MTFP1Q9UDX5 166 aa10.85□□□□□ -0.67
HDAC6-204ENST00000376643 EPPK1P58107 5090 aaKnown RBP10.85□□□□□ -0.67
HDAC6-204ENST00000376643 CLN5O75503 358 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 TMEM50AO95807 157 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 SPP1P10451 314 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-204ENST00000376643 MRPS10P82664 201 aaKnown RBP10.84□□□□□ -0.67
HDAC6-204ENST00000376643 EWSR1Q01844 656 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC6-204ENST00000376643 PVRIGQ6DKI7 326 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 NOXA1Q86UR1 476 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms