RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LINC00869P0C866 280 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 STAG3L2P0CL84 134 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 STAG3L3P0CL85 134 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 DEFA4P12838 97 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 LCN2P80188 198 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CCDC144NLQ6NUI1 221 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 LHFPL4Q7Z7J7 247 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CCL19Q99731 98 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SRSF8Q9BRL6 282 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 POLR3KQ9Y2Y1 108 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 NDUFA3O95167 84 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SNRNP70P08621 437 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CD81P60033 236 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 RHOBP62745 196 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 NPBQ8NG41 125 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 NIPSNAP3BQ9BS92 247 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 FBXL15Q9H469 300 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 RPS10P5Q9NQ39 176 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 HILPDAQ9Y5L2 63 aa14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TMEM250H0YL14 139 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FOXH1O75593 365 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MOSP00540 346 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SSBP2P81877 361 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TUBA4BQ9H853 241 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TBL2Q9Y4P3 447 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PTPN13Q12923 2485 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TEX22C9J3V5 150 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 NBR2O15453 112 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 CXorf1O96002 111 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR10J1P30954 320 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 CEBPGP53567 150 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TVP23CQ96ET8 276 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 C20orf24Q9BUV8 137 aa14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FNDC4Q9H6D8 234 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQB1-201ENST00000374943 CRYGCP07315 174 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SRSF1Q07955 248 aaKnown RBP eCLIP14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MMDQ15546 238 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MLANAQ16655 118 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ETFRF1Q6IPR1 90 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 THAP8Q8NA92 274 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR1P1Q8NH06 330 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TBX15Q96SF7 602 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 C19orf24Q9BVV8 132 aa14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SPTAN1Q13813 2472 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 NDUFS8O00217 210 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 CORTO00230 105 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TOX4O94842 621 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 AREGP15514 252 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 UBE2E1P51965 193 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PNRC1Q12796 327 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 EBI3Q14213 229 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 AKIRIN2Q53H80 203 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR2T10Q8NGZ9 312 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR2T6Q8NHC8 308 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ABHD5Q8WTS1 349 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SRSF12Q8WXF0 261 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 EAF1Q96JC9 268 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PIMREGQ9BSJ6 248 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 DOPEY2Q9Y3R5 2298 aa14.37□□□□□ -0.11
HLA-DQB1-201ENST00000374943 A0A087WWC5 75 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PAGE4O60829 102 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TSPAN9O75954 239 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 REG1AP05451 166 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 GNB1P62873 340 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PLGLAQ15195 96 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 C15orf54Q8N8G6 183 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 NANPQ8TBE9 248 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 GATAD1Q8WUU5 269 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TXNDC17Q9BRA2 123 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 F11RQ9Y624 299 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 VWC2LB2RUY7 222 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 AKR1C3P42330 323 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MFAP2P55001 183 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 LGALS4P56470 323 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SSX2Q16385 188 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 CYP2G1PQ6ZSU1 146 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 Q8N6K4 173 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 C10orf105Q8TEF2 133 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FAM168AQ92567 244 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ACY3Q96HD9 319 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SEPSECSQ9HD40 501 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FUT9Q9Y231 359 aa14.36□□□□□ -0.11
HLA-DQB1-201ENST00000374943 A0A1W2PRD5 423 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 A0A1W2PRF3 423 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 A0A1W2PRM7 423 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 COLCA2A8K830 154 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 B4DEV8 164 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FCN1O00602 326 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MT-CO2P00403 227 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR5G3P0C626 314 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ATF4P18848 351 aaPredicted RBP14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 DYNAPQ8N1N2 210 aa14.35□□□□□ -0.11
HLA-DQB1-201ENST00000374943 IGKV1D-37A0A075B6S9 117 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 TCRBV4S1A1TA0A5B7 111 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 C11orf94C9JXX5 98 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms