RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TET2Q6N021 2002 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 ZFP92A6NM28 416 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 SOX15O60248 233 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 MC5RP33032 325 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 SRP14P37108 136 aaKnown RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 AKIRIN2Q53H80 203 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 AWAT1Q58HT5 328 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 OR11H6Q8NGC7 330 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 VSTM2AQ8TAG5 236 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 M0R036 132 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 IGLV1-47P01700 117 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 FBP1P09467 338 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 RPL8P62917 257 aaKnown RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 ACOT6Q3I5F7 207 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 CYB561D1Q8N8Q1 229 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 C17orf50Q8WW18 174 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
C9orf78-201ENST00000372447 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-201ENST00000372447 LOC105371267A0A1B0GV96 52 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 CYB5BO43169 146 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
C9orf78-201ENST00000372447 OPRK1P41145 380 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 CEBPGP53567 150 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 FAM122CQ6P4D5 195 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 BEND2Q8NDZ0 799 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 TMEM167AQ8TBQ9 72 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 COMMD5Q9GZQ3 224 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
C9orf78-201ENST00000372447 C7orf77A4D0Y5 90 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 ODF3BA8MYP8 253 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 CRLF1O75462 422 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 IFNA1P01562 189 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 SNRNP70P08621 437 aaKnown RBP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 ATP5IP56385 69 aaPredicted RBP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 BCL6BQ8N143 479 aaPredicted RBP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 MGST2Q99735 147 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 C20orf24Q9BUV8 137 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 NDUFA4L2Q9NRX3 87 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
C9orf78-201ENST00000372447 CUBNO60494 3623 aa12.82□□□□□ -0.36
C9orf78-201ENST00000372447 NPFFO15130 113 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 HMGB3O15347 200 aaKnown RBP12.81□□□□□ -0.36
C9orf78-201ENST00000372447 SRD5A1P18405 259 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 BPIFB3P59826 476 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 RHEBQ15382 184 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 C2orf83Q53S99 150 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 LDLRAD2Q5SZI1 272 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 RBMS3Q6XE24 437 aaKnown RBP12.81□□□□□ -0.36
C9orf78-201ENST00000372447 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 GGTLC1Q9BX51 225 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 VAX2Q9UIW0 290 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 BUB1B-PAK6H3BSN5 160 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 SAA4P35542 130 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 AKR1C3P42330 323 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 VMA21Q3ZAQ7 101 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 P2RX4Q99571 388 aa12.81□□□□□ -0.36
C9orf78-201ENST00000372447 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 H3BQ15 152 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 LGALS7P47929 136 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 CDC34P49427 236 aaPredicted RBP12.8□□□□□ -0.36
C9orf78-201ENST00000372447 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 OR10W1Q8NGF6 305 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
C9orf78-201ENST00000372447 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.36
C9orf78-201ENST00000372447 IGHV3-72A0A0B4J1Y9 119 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 A0A0U1RQK1 487 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 A0A1W2PN81 502 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 YIF1AO95070 293 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
C9orf78-201ENST00000372447 CHRNA7P36544 502 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 LGALS4P56470 323 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 GCSAMLQ5JQS6 135 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 RITA1Q96K30 269 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
C9orf78-201ENST00000372447 ZNF430Q9H8G1 570 aaPredicted RBP12.79□□□□□ -0.36
C9orf78-201ENST00000372447 AMMECR1Q9Y4X0 333 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms