RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ATOH7Q8N100 152 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 A0A1B0GW64 132 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 LEPROTL1O95214 131 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 EFNB3Q15768 340 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 NEU1Q99519 415 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
SCAF1-201ENST00000360565 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 UNQ5815/PRO19632Q6UWF5 114 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 OCC1Q8TAD7 63 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 TCTAP57738 103 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 ZNF585BQ52M93 769 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 CBY3A6NI87 242 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 COL5A1-AS1Q5SY13 56 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM116Q8NCL8 245 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
SCAF1-201ENST00000360565 GGTLC1Q9BX51 225 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 TRBV24-1A0A075B6N3 115 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 LOC105371242A0A075B767 164 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 FAM106CPP0CH98 169 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 REC114Q7Z4M0 266 aa13.55□□□□□ -0.24
SCAF1-201ENST00000360565 RNASE7Q9H1E1 156 aaKnown RBP13.55□□□□□ -0.24
SCAF1-201ENST00000360565 PEX7O00628 323 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 OR5R1Q8NH85 324 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 PCDH15Q96QU1 1955 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 TRAV3A0A0B4J244 114 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 TMPRSS3P57727 454 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 PRR14LQ5THK1 2151 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 IFITM10A6NMD0 228 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 OR52E5Q8NH55 327 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
SCAF1-201ENST00000360565 RPUSD1Q9UJJ7 312 aaKnown RBP13.54□□□□□ -0.24
SCAF1-201ENST00000360565 ZNF503-AS2A6NEH8 195 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 CGB1A6NKQ9 187 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-201ENST00000360565 A0A1B0GV90 55 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 SOD3P08294 240 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
SCAF1-201ENST00000360565 DPM3Q9P2X0 92 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 CBY1Q9Y3M2 126 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 IGLV3-1P01715 115 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 PRCDQ00LT1 54 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 TWIST1Q15672 202 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 PMCHL1Q16048 86 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 CYYR1Q96J86 154 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 CRIM1Q9NZV1 1036 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 HINT1P49773 126 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-201ENST00000360565 CD69Q07108 199 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 C10orf55Q5SWW7 151 aa13.53□□□□□ -0.24
SCAF1-201ENST00000360565 NPIPB11E5RHQ5 1161 aa13.52□□□□□ -0.24
SCAF1-201ENST00000360565 SPANXN1Q5VSR9 72 aa13.52□□□□□ -0.24
SCAF1-201ENST00000360565 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM242Q9NWH2 141 aa13.52□□□□□ -0.24
SCAF1-201ENST00000360565 BMI1P35226 326 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 PYYP10082 97 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 RPL7P18124 248 aaKnown RBP13.52□□□□□ -0.25
SCAF1-201ENST00000360565 DERL1Q9BUN8 251 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 MBNL3Q9NUK0 354 aaKnown RBP13.52□□□□□ -0.25
SCAF1-201ENST00000360565 RABAC1Q9UI14 185 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 CEP350Q5VT06 3117 aa13.52□□□□□ -0.25
SCAF1-201ENST00000360565 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 STAG3L3P0CL85 134 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 CKS2P33552 79 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 TBR1Q16650 682 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 C1QL4Q86Z23 238 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 HIST1H2BLQ99880 126 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 TEX38Q6PEX7 206 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 TRAV30A0A087WSZ9 112 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 ANOS1P23352 680 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 TMEM78Q5T7P6 136 aa13.51□□□□□ -0.25
SCAF1-201ENST00000360565 TBL2Q9Y4P3 447 aaKnown RBP13.51□□□□□ -0.25
SCAF1-201ENST00000360565 FAM90A9PA6NNJ1 464 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 SERF1AO75920 110 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 HBBP68871 147 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV1D-17A0A075B6S4 117 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-201ENST00000360565 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 WFDC3Q8IUB2 231 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 HIST3H2BBQ8N257 126 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 SEPSECSQ9HD40 501 aaKnown RBP13.5□□□□□ -0.25
SCAF1-201ENST00000360565 IL15RAQ13261 267 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-201ENST00000360565 PCNX3Q9H6A9 2034 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV3-15P01624 115 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 IGHG3P01860 377 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 MYOD1P15172 320 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 TAS2R60P59551 318 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms