RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 MMP9P14780 707 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 SPANXN5Q5MJ07 72 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 TEX43Q6ZNM6 134 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 HSD17B10Q99714 261 aaKnown RBP10.32□□□□□ -0.76
GGPS1-202ENST00000358966 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 RPUSD1Q9UJJ7 312 aaKnown RBP10.32□□□□□ -0.76
GGPS1-202ENST00000358966 UBR5O95071 2799 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-202ENST00000358966 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 PTPN13Q12923 2485 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 K7ERU9 68 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 SYNGR2O43760 224 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 IGKV1-16P04430 117 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 ZBTB34Q8NCN2 500 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
GGPS1-202ENST00000358966 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 WSB1Q9Y6I7 421 aa10.32□□□□□ -0.76
GGPS1-202ENST00000358966 USP9YO00507 2555 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-202ENST00000358966 ABCA1O95477 2261 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 TRAV30A0A087WSZ9 112 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 P0C879 139 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-202ENST00000358966 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 PRR27Q6MZM9 219 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 H2BFWTQ7Z2G1 175 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 B4DEV8 164 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 PSG1P11464 419 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 VAMP3Q15836 100 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 HAPLN4Q86UW8 402 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
GGPS1-202ENST00000358966 FUT9Q9Y231 359 aa10.31□□□□□ -0.76
GGPS1-202ENST00000358966 STRAPQ9Y3F4 350 aaKnown RBP10.31□□□□□ -0.76
GGPS1-202ENST00000358966 WNT2P09544 360 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 C11orf71Q6IPW1 123 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM182Q6ZP80 229 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-202ENST00000358966 ERASQ7Z444 233 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM242Q9NWH2 141 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM8BA6NDV4 472 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 GPR157Q5UAW9 335 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM170AQ8WVE7 144 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 S1PR3Q99500 378 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 PSENENQ9NZ42 101 aa10.3□□□□□ -0.76
GGPS1-202ENST00000358966 RAB29O14966 203 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM256Q8N2U0 113 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 DDB2Q92466 427 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 NUPR1O60356 82 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 ARF6P62330 175 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 ICAM4Q14773 271 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 SLC25A48Q6ZT89 311 aaKnown RBP10.29□□□□□ -0.76
GGPS1-202ENST00000358966 NECAP1Q8NC96 275 aa10.29□□□□□ -0.76
GGPS1-202ENST00000358966 MRPL20Q9BYC9 149 aaKnown RBP10.29□□□□□ -0.76
GGPS1-202ENST00000358966 IGHV3-72A0A0B4J1Y9 119 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 CT45A7P0DMV0 189 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 ZNF709Q8N972 641 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 TRAV34A0A0B4J273 112 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 PPOXP50336 477 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 OR4C12Q96R67 309 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
GGPS1-202ENST00000358966 SRRM4A7MD48 611 aaKnown RBP10.27□□□□□ -0.76
GGPS1-202ENST00000358966 SLC25A6P12236 298 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 LGALS7P47929 136 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 DLX6P56179 175 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 TMEM155Q4W5P6 130 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 SPSB3Q6PJ21 355 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 TXN2Q99757 166 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 RSG1Q9BU20 258 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 KAAG1Q9UBP8 84 aa10.27□□□□□ -0.76
GGPS1-202ENST00000358966 BORCS7-ASMTA0A0B4J1R7 106 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 CEBPZOSA8MTT3 80 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 HSPB1P04792 205 aaKnown RBP10.27□□□□□ -0.77
GGPS1-202ENST00000358966 COX7A1P24310 79 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 MC5RP33032 325 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.77
GGPS1-202ENST00000358966 Q6ZN92 141 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 OR10X1Q8NGY0 326 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-202ENST00000358966 SLC45A2Q9UMX9 530 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 CORTO00230 105 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
GGPS1-202ENST00000358966 MEF2CQ06413 473 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms