RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NUDT11Q96G61 164 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 PLPPR2Q96GM1 343 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 FAM234AQ9H0X4 552 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 KLF13Q9Y2Y9 288 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-202ENST00000348987 TRAV3A0A0B4J244 114 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 GAGE12BA1L429 117 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 OR4C46A6NHA9 309 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 KLRC4-KLRK1H3BQV0 150 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 HAND1O96004 215 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 TBC1D28Q2M2D7 210 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 FAM214BQ7L5A3 538 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 SLC25A40Q8TBP6 338 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 SSBP4Q9BWG4 385 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-202ENST00000348987 ARL2-SNX15V9GYD0 113 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 CACNA1GO43497 2377 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 hDV102S1A0JD36 115 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 TMEM238C9JI98 176 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 RPS20P60866 119 aaKnown RBP15.31■□□□□ 0.04
SCARF1-202ENST00000348987 DEFB125Q8N687 156 aa15.31■□□□□ 0.04
SCARF1-202ENST00000348987 GATA2P23769 480 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-202ENST00000348987 MFAP2P55001 183 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 FOXF2Q12947 444 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 FAM216AQ8WUB2 273 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 ZC2HC1AQ96GY0 325 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 TMEM70Q9BUB7 260 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 TRGV5A0A0B4J1U4 118 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 OOEPA6NGQ2 149 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 SH2D7A6NKC9 451 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-202ENST00000348987 GGTLC3B5MD39 225 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 IGFBP2P18065 325 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 MPV17P39210 176 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 LTC4SQ16873 150 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 Q8IYB0 196 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 WDR31Q8NA23 367 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 OR2T6Q8NHC8 308 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 HSD17B10Q99714 261 aaKnown RBP15.3■□□□□ 0.04
SCARF1-202ENST00000348987 TOX4O94842 621 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 IGHV1-2P23083 117 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 Q8TCH9 128 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 POLDIP2Q9Y2S7 368 aa15.3■□□□□ 0.04
SCARF1-202ENST00000348987 DCHS1Q96JQ0 3298 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 HCFC1P51610 2035 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 TMEM11P17152 192 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 PSG9Q00887 426 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 Q6ZR03 302 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 NANOS1Q8WY41 292 aaKnown RBP15.29■□□□□ 0.04
SCARF1-202ENST00000348987 ZNF355PQ9NSJ1 428 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 RP1L1Q8IWN7 2480 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-202ENST00000348987 K7ERU9 68 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 SAP30LQ9HAJ7 183 aa15.29■□□□□ 0.04
SCARF1-202ENST00000348987 GVINP1Q7Z2Y8 2422 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 TET2Q6N021 2002 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-202ENST00000348987 M0R1X1 148 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 OR7C2O60412 319 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 PROP1O75360 226 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 RIPPLY3P57055 190 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 OR52E5Q8NH55 327 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 ZNF503Q96F45 646 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 LINC00479Q96M42 142 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 MEGF9Q9H1U4 602 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 FZR1Q9UM11 496 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 AGFG2O95081 481 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 CAMPP49913 170 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 PPOXP50336 477 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 ZNF766Q5HY98 468 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 IGF2BP2-AS1Q96M15 143 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 PLEKHA3Q9HB20 300 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 ST20Q9HBF5 79 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 TMEM167BQ9NRX6 74 aa15.28■□□□□ 0.04
SCARF1-202ENST00000348987 CD46P15529 392 aa15.27■□□□□ 0.04
SCARF1-202ENST00000348987 LINC00173Q6ZV60 143 aa15.27■□□□□ 0.04
SCARF1-202ENST00000348987 COQ2Q96H96 371 aa15.27■□□□□ 0.04
SCARF1-202ENST00000348987 URB1-AS1Q96HZ7 61 aa15.27■□□□□ 0.04
SCARF1-202ENST00000348987 NCOR1P1Q9H4R4 102 aa15.27■□□□□ 0.04
SCARF1-202ENST00000348987 ZFHX2Q9C0A1 2572 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-202ENST00000348987 CADP27708 2225 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 TRAV8-6A0A0B4J262 113 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 SAP30O75446 220 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 DUTP33316 252 aaKnown RBP15.27■□□□□ 0.03
SCARF1-202ENST00000348987 PRR20EP86478 221 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 PRR20CP86479 221 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 PRR20DP86480 221 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 PRR20BP86481 221 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 PRR20AP86496 221 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 RAB31Q13636 194 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 KLF5Q13887 457 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-202ENST00000348987 SLC25A34Q6PIV7 304 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 NUP35Q8NFH5 326 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 OBP2BQ9NPH6 170 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 RPH3ALQ9UNE2 315 aa15.27■□□□□ 0.03
SCARF1-202ENST00000348987 ZNF841Q6ZN19 808 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 KLF14Q8TD94 323 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-202ENST00000348987 WIPF2Q8TF74 440 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-202ENST00000348987 METRNQ9UJH8 293 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 TCF19Q9Y242 345 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 CLEC2AQ6UVW9 174 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 C11orf53Q8IXP5 236 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 OR13A1Q8NGR1 328 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 SARAFQ96BY9 339 aa15.26■□□□□ 0.03
SCARF1-202ENST00000348987 NABP2Q9BQ15 211 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms