RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 C11orf87Q6NUJ2 197 aa14.97□□□□□ -0.01
CLTA-202ENST00000345519 PLET1Q6UQ28 207 aa14.97□□□□□ -0.01
CLTA-202ENST00000345519 MARC2Q969Z3 335 aa14.97□□□□□ -0.01
CLTA-202ENST00000345519 C19orf73Q9NVV2 129 aa14.97□□□□□ -0.01
CLTA-202ENST00000345519 GAR1Q9NY12 217 aaKnown RBP14.97□□□□□ -0.01
CLTA-202ENST00000345519 OR2T8A6NH00 312 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 CTSGP08311 255 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 NMSQ5H8A3 153 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 TMEM268Q5VZI3 342 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 SLC35G3Q8N808 338 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 SDHCQ99643 169 aaPredicted RBP14.96□□□□□ -0.01
CLTA-202ENST00000345519 SLC25A21Q9BQT8 299 aaPredicted RBP14.96□□□□□ -0.01
CLTA-202ENST00000345519 CHRDL1Q9BU40 450 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 PALMDQ9NP74 551 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 KCNIP3Q9Y2W7 256 aa14.96□□□□□ -0.01
CLTA-202ENST00000345519 A0A0B4J2A0 478 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 ZNF785A8K8V0 405 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 NDUFA4O00483 81 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 FRMD6-AS1P0C7T7 363 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 RNASE2P10153 161 aaKnown RBP14.95□□□□□ -0.02
CLTA-202ENST00000345519 SPCS3P61009 180 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 GPR146Q96CH1 333 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 PDCD10Q9BUL8 212 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.95□□□□□ -0.02
CLTA-202ENST00000345519 CACFD1Q9UGQ2 172 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 MLXQ9UH92 298 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 SHPKQ9UHJ6 478 aa14.95□□□□□ -0.02
CLTA-202ENST00000345519 CORTO00230 105 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 MT-CO2P00403 227 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 IFNA17P01571 189 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 IGHV4-30-4P0DP06 118 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 TMEM128Q5BJH2 165 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 LRTM2Q8N967 370 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 CACNG8Q8WXS5 425 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 OR10C1Q96KK4 312 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 MRPL27Q9P0M9 148 aaKnown RBP14.94□□□□□ -0.02
CLTA-202ENST00000345519 CACNG5Q9UF02 275 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 UFC1Q9Y3C8 167 aa14.94□□□□□ -0.02
CLTA-202ENST00000345519 PIGBOS1A0A0B4J2F0 54 aa14.93□□□□□ -0.02
CLTA-202ENST00000345519 DUXBA0A1W2PPF3 345 aa14.93□□□□□ -0.02
CLTA-202ENST00000345519 SRPXP78539 464 aa14.93□□□□□ -0.02
CLTA-202ENST00000345519 BAK1Q16611 211 aa14.93□□□□□ -0.02
CLTA-202ENST00000345519 SPINK9Q5DT21 86 aa14.93□□□□□ -0.02
CLTA-202ENST00000345519 DAZ1Q9NQZ3 744 aaKnown RBP14.93□□□□□ -0.02
CLTA-202ENST00000345519 IGHV3-21A0A0B4J1V1 117 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 C15orf62A8K5M9 175 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 K7EMT4 169 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 MFAP4P55083 255 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 TM4SF20Q53R12 229 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 SBSPONQ8IVN8 264 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 RNASE11Q8TAA1 199 aaKnown RBP14.92□□□□□ -0.02
CLTA-202ENST00000345519 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 MISP3Q96FF7 219 aa14.92□□□□□ -0.02
CLTA-202ENST00000345519 KMT2CQ8NEZ4 4911 aaKnown RBP14.91□□□□□ -0.02
CLTA-202ENST00000345519 ZNF320A2RRD8 509 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 ANXA3P12429 323 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 AKR1C4P17516 323 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 SNCAP37840 140 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 HOXA1P49639 335 aaPredicted RBP14.91□□□□□ -0.02
CLTA-202ENST00000345519 SUB1P53999 127 aaKnown RBP eCLIP14.91□□□□□ -0.021e-7■■■■■ 34.6
CLTA-202ENST00000345519 RELQ04864 619 aaPredicted RBP14.91□□□□□ -0.02
CLTA-202ENST00000345519 RBMS2Q15434 407 aaKnown RBP14.91□□□□□ -0.02
CLTA-202ENST00000345519 GTSCR1Q86UQ5 136 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 TMEM61Q8N0U2 210 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 LGI3Q8N145 548 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 UXS1Q8NBZ7 420 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 HSPB7Q9UBY9 170 aa14.91□□□□□ -0.02
CLTA-202ENST00000345519 NBEAL2Q6ZNJ1 2754 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 TRAV25A0A0B4J276 109 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 NAP1L6A6NFF2 107 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 SULT1A3P0DMM9 295 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 SULT1A4P0DMN0 295 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 HTR2BP41595 481 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 CCR6P51684 374 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 UBE2MP61081 183 aaKnown RBP14.9□□□□□ -0.02
CLTA-202ENST00000345519 C2orf83Q53S99 150 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 Q56UQ5 140 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 ZNF57Q68EA5 555 aaPredicted RBP14.9□□□□□ -0.02
CLTA-202ENST00000345519 LINC00322Q6ZN03 302 aaPredicted RBP14.9□□□□□ -0.02
CLTA-202ENST00000345519 LINC00299Q6ZSB3 139 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 TM2D3Q9BRN9 247 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 FNDC4Q9H6D8 234 aaPredicted RBP14.9□□□□□ -0.02
CLTA-202ENST00000345519 PRR13Q9NZ81 148 aa14.9□□□□□ -0.02
CLTA-202ENST00000345519 CSMD3Q7Z407 3707 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 IGHV3-35A0A0C4DH35 117 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 NUPL2O15504 423 aaKnown RBP14.89□□□□□ -0.03
CLTA-202ENST00000345519 PITX3O75364 302 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 SLC25A6P12236 298 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 BTCP35070 178 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 LYZL2Q7Z4W2 148 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 UBAC2Q8NBM4 344 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 TMEM170AQ8WVE7 144 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 WDR89Q96FK6 387 aaPredicted RBP14.89□□□□□ -0.03
CLTA-202ENST00000345519 U3KQK5 164 aa14.89□□□□□ -0.03
CLTA-202ENST00000345519 TNFRSF9Q07011 255 aa14.88□□□□□ -0.03
CLTA-202ENST00000345519 SMCO1Q147U7 214 aa14.88□□□□□ -0.03
CLTA-202ENST00000345519 BTNL8Q6UX41 500 aa14.88□□□□□ -0.03
CLTA-202ENST00000345519 PINX1Q96BK5 328 aaKnown RBP14.88□□□□□ -0.03
CLTA-202ENST00000345519 C7orf50Q9BRJ6 194 aaKnown RBP14.88□□□□□ -0.03
CLTA-202ENST00000345519 ENY2Q9NPA8 101 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms