RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 IGHG2P01859 326 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 CD69Q07108 199 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 C9orf152Q5JTZ5 239 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 TMEM86BQ8N661 226 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 PHYHIPLQ96FC7 376 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 DMRT1Q9Y5R6 373 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 IFNA7P01567 189 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 CRIP2P52943 208 aaPredicted RBP12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 ALKAL2Q6UX46 152 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 TMEM68Q96MH6 324 aa12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 PARD6GQ9BYG4 376 aaPredicted RBP12.86□□□□□ -0.35
CEACAM1-202ENST00000344391 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 FNDC10F2Z333 226 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 MDKP21741 143 aaPredicted RBP12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 MLANAQ16655 118 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 SLC25A24Q6NUK1 477 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 RBMS3Q6XE24 437 aaKnown RBP12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 Q6ZS46 218 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 SLC35E3Q7Z769 313 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 CACNG8Q8WXS5 425 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 WDR61Q9GZS3 305 aaKnown RBP12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 CDC42EP3Q9UKI2 254 aa12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
CEACAM1-202ENST00000344391 CORTO00230 105 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 IGF1P05019 195 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 DEFA4P12838 97 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 ECSCRQ19T08 205 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 TREML4Q6UXN2 200 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 SCGB1C1Q8TD33 95 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 G3V318 75 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 SPP1P10451 314 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 OPRK1P41145 380 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 SLC16A13Q7RTY0 426 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 TMED6Q8WW62 240 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 FANCD2OSQ96PS1 177 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 UBQLN2Q9UHD9 624 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
CEACAM1-202ENST00000344391 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 CYSRT1A8MQ03 144 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 PRH1P02810 166 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 SEC11BP0C7V7 166 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 SRD5A1P18405 259 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 RUNX1Q01196 453 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 GAMTQ14353 236 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 GNPNAT1Q96EK6 184 aaPredicted RBP12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 DUX5Q96PT3 197 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
CEACAM1-202ENST00000344391 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 MT-CO2P00403 227 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 FGF7P21781 194 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 KLK9Q2XQG4 91 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 ETFRF1Q6IPR1 90 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 BTNL8Q6UX41 500 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 OR2T6Q8NHC8 308 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 SLC25A32Q9H2D1 315 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 KLK9Q9UKQ9 250 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
CEACAM1-202ENST00000344391 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 I3L2K1 104 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 AP4M1O00189 453 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 Q71RC1 249 aaPredicted RBP12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 TMEM144Q7Z5S9 345 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 RSG1Q9BU20 258 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 NPFFR1Q9GZQ6 430 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
CEACAM1-202ENST00000344391 RPS10-NUDT3A0A1W2PQS6 291 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 CYB5BO43169 146 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 MPDU1O75352 247 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 TSPAN9O75954 239 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 AKR1C1Q04828 323 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 CENPVQ7Z7K6 275 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-202ENST00000344391 NPCDR1Q9BY65 106 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms