RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 FNDC10F2Z333 226 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 TEX46H3BTG2 121 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 RRHO14718 337 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 SOX15O60248 233 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 MPDU1O75352 247 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 CRYGBP07316 175 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 MYOD1P15172 320 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 ZP3P21754 424 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 FGF7P21781 194 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 UBE2E1P51965 193 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 LGALS4P56470 323 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 ZNF616Q08AN1 781 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 PSG5Q15238 335 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 BSXQ3C1V8 233 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 C2orf83Q53S99 150 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 LDLRAD2Q5SZI1 272 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 LFNGQ8NES3 379 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 FAM213BQ8TBF2 198 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 CFHR4Q92496 578 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 RBMXL1Q96E39 390 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 TBX15Q96SF7 602 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 RSG1Q9BU20 258 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 HRH4Q9H3N8 390 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 C1RLQ9NZP8 487 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 C17orf112F2Z3M2 114 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 TSPAN15O95858 294 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 CA2P00918 260 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 IFNA4P05014 189 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 ERHP84090 104 aaKnown RBP10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 FBLN7Q53RD9 439 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 TMEM170AQ8WVE7 144 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 SIGLEC9Q9Y336 463 aa10.72□□□□□ -0.69
HERPUD1-202ENST00000344114 BTBD17A6NE02 478 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 MOSP00540 346 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 CRYBA1P05813 215 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 PRSS8Q16651 343 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 MRGPRG-AS1Q2M3A8 158 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 Q6YL49 198 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 ZNF709Q8N972 641 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 TPSG1Q9NRR2 321 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 FBXO7Q9Y3I1 522 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 HILPDAQ9Y5L2 63 aa10.71□□□□□ -0.69
HERPUD1-202ENST00000344114 ACTL6BO94805 426 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 NDUFA3O95167 84 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 HBE1P02100 147 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 MBP02144 154 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 OPN1MWP04001 364 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 OPN1MW2P0DN77 364 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 OPN1MW3P0DN78 364 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 CNTFRP26992 372 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 SNCAP37840 140 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 FHITP49789 147 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 BPIFB3P59826 476 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 RAB2AP61019 212 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 TMEM41BQ5BJD5 291 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 PPP1R27Q86WC6 154 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 C1QL4Q86Z23 238 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 TMEM86BQ8N661 226 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 OR2T10Q8NGZ9 312 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 RITA1Q96K30 269 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 KIAA1456Q9P272 454 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
HERPUD1-202ENST00000344114 SMCO3A2RU48 225 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 NBR2O15453 112 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 IGKV1D-33P01593 117 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 IGKV1-33P01594 117 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 SUB1P53999 127 aaKnown RBP eCLIP10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 TNXAQ16473 311 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 NPBQ8NG41 125 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 MALSU1Q96EH3 234 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 NPVFQ9HCQ7 196 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
HERPUD1-202ENST00000344114 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 SNRNP70P08621 437 aaKnown RBP10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 PROK1P58294 105 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 EBI3Q14213 229 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 PLGLAQ15195 96 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 MMDQ15546 238 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 SSX2Q16385 188 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 ZNF114Q8NC26 417 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 OR10W1Q8NGF6 305 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 LINC00052Q96N35 136 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms