RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 A1L4Q6 167 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 TEX22C9J3V5 150 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 LINC00869P0C866 280 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 APELAP0DMC3 54 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 CEBPGP53567 150 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 PRR20EP86478 221 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 PRR20CP86479 221 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 PRR20DP86480 221 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 PRR20BP86481 221 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 PRR20AP86496 221 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 CYB561D1Q8N8Q1 229 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 NRGNQ92686 78 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 FNDC4Q9H6D8 234 aaPredicted RBP15.97■□□□□ 0.15
RTN1-202ENST00000342503 VAX2Q9UIW0 290 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 TBL2Q9Y4P3 447 aaKnown RBP15.97■□□□□ 0.15
RTN1-202ENST00000342503 ZNF462Q96JM2 2506 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 NDUFA3O95167 84 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 OR10J1P30954 320 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 RBMS3Q6XE24 437 aaKnown RBP15.96■□□□□ 0.15
RTN1-202ENST00000342503 ZNF114Q8NC26 417 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 OR2T10Q8NGZ9 312 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 SRSF12Q8WXF0 261 aaKnown RBP15.96■□□□□ 0.15
RTN1-202ENST00000342503 PERPQ96FX8 193 aa15.96■□□□□ 0.15
RTN1-202ENST00000342503 NAV3Q8IVL0 2385 aa15.96■□□□□ 0.14
RTN1-202ENST00000342503 MFAP2P55001 183 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 PVRIGQ6DKI7 326 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 C19orf35Q6ZS72 473 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 IQCF2Q8IXL9 164 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 GATAD1Q8WUU5 269 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 ACY3Q96HD9 319 aa15.95■□□□□ 0.14
RTN1-202ENST00000342503 SPTAN1Q13813 2472 aaKnown RBP15.95■□□□□ 0.14
RTN1-202ENST00000342503 IGHV4-30-2A0A087WSY4 118 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 AKIRIN2Q53H80 203 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 TMEM88Q6PEY1 159 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 AJUBAQ96IF1 538 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 COL12A1Q99715 3063 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 WNK2Q9Y3S1 2297 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 SLC35E3Q7Z769 313 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 CBLN2Q8IUK8 224 aa15.94■□□□□ 0.14
RTN1-202ENST00000342503 CNIH1O95406 144 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 IGHV3-48P01763 117 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 PSMB3P49720 205 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 AWAT1Q58HT5 328 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 Q8N6K4 173 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 ABHD5Q8WTS1 349 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 MALSU1Q96EH3 234 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 MISP3Q96FF7 219 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 C20orf24Q9BUV8 137 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 MANBALQ9NQG1 85 aa15.93■□□□□ 0.14
RTN1-202ENST00000342503 PUS1Q9Y606 427 aaKnown RBP eCLIP15.93■□□□□ 0.14
RTN1-202ENST00000342503 M0R036 132 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 STAG3L2P0CL84 134 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 STAG3L3P0CL85 134 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 GATA2P23769 480 aaPredicted RBP15.92■□□□□ 0.14
RTN1-202ENST00000342503 PAX8Q06710 450 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 EBI3Q14213 229 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 TMEM249Q2WGJ8 235 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 SPATA31B1PQ5VZV4 182 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 OR1P1Q8NH06 330 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 NPIPB3Q92617 1050 aa15.92■□□□□ 0.14
RTN1-202ENST00000342503 MRPL36Q9P0J6 103 aaKnown RBP15.92■□□□□ 0.14
RTN1-202ENST00000342503 F11RQ9Y624 299 aaKnown RBP15.92■□□□□ 0.14
RTN1-202ENST00000342503 UBR5O95071 2799 aaPredicted RBP15.92■□□□□ 0.14
RTN1-202ENST00000342503 ABCA2Q9BZC7 2435 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 TSPAN4O14817 238 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 CD81P60033 236 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 RHOBP62745 196 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 C5orf64Q2M2E5 130 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 MYO18BQ8IUG5 2567 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 MED13LQ71F56 2210 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 PAX1P15863 534 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 SAA4P35542 130 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 MEF2BQ02080 365 aaPredicted RBP15.91■□□□□ 0.14
RTN1-202ENST00000342503 FAM90A2PQ658T7 463 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 ETFRF1Q6IPR1 90 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 CYP2G1PQ6ZSU1 146 aa15.91■□□□□ 0.14
RTN1-202ENST00000342503 SRSF8Q9BRL6 282 aaKnown RBP15.91■□□□□ 0.14
RTN1-202ENST00000342503 SEPSECSQ9HD40 501 aaKnown RBP15.91■□□□□ 0.14
RTN1-202ENST00000342503 UTP20O75691 2785 aaKnown RBP15.9■□□□□ 0.14
RTN1-202ENST00000342503 CENPVL3A0A0U1RRI6 287 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 C7orf77A4D0Y5 90 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 H3BQ15 152 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 NPFFO15130 113 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 PAGE4O60829 102 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 CRYGCP07315 174 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 ARL14EPLP0DKL9 152 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 TMEM11P17152 192 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 TAGLN2P37802 199 aaKnown RBP15.9■□□□□ 0.14
RTN1-202ENST00000342503 AKR1C3P42330 323 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 FAM120AOSQ5T036 256 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 THAP8Q8NA92 274 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 SLC25A33Q9BSK2 321 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 RPS10P5Q9NQ39 176 aa15.9■□□□□ 0.14
RTN1-202ENST00000342503 IGKV1D-37A0A075B6S9 117 aa15.89■□□□□ 0.13
RTN1-202ENST00000342503 NCBP2LA6PVI3 153 aaKnown RBP15.89■□□□□ 0.13
RTN1-202ENST00000342503 CXorf1O96002 111 aa15.89■□□□□ 0.13
RTN1-202ENST00000342503 FXYD3Q14802 87 aa15.89■□□□□ 0.13
RTN1-202ENST00000342503 RUSC1-AS1Q66K80 236 aa15.89■□□□□ 0.13
RTN1-202ENST00000342503 DMRT1Q9Y5R6 373 aa15.89■□□□□ 0.13
RTN1-202ENST00000342503 CORTO00230 105 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms