RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
HPS1-202ENST00000338546 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
HPS1-202ENST00000338546 RHOBP62745 196 aa12.97□□□□□ -0.33
HPS1-202ENST00000338546 ATRAIDQ6UW56 229 aa12.97□□□□□ -0.33
HPS1-202ENST00000338546 THAP8Q8NA92 274 aa12.97□□□□□ -0.33
HPS1-202ENST00000338546 F11RQ9Y624 299 aaKnown RBP12.97□□□□□ -0.33
HPS1-202ENST00000338546 IGHV4-30-2A0A087WSY4 118 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 NPFFO15130 113 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 LINC00869P0C866 280 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 FGF8P55075 233 aaPredicted RBP12.96□□□□□ -0.33
HPS1-202ENST00000338546 GNB1P62873 340 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 SSBP2P81877 361 aaPredicted RBP12.96□□□□□ -0.33
HPS1-202ENST00000338546 HES1Q14469 280 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 CLRN3Q8NCR9 226 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 NANPQ8TBE9 248 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 RXFP4Q8TDU9 374 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 AJUBAQ96IF1 538 aa12.96□□□□□ -0.33
HPS1-202ENST00000338546 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 A0A1W2PRD5 423 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 A0A1W2PRF3 423 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 A0A1W2PRM7 423 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 FCN1O00602 326 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 CNIH1O95406 144 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 MT-CO2P00403 227 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 STAG3L2P0CL84 134 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 STAG3L3P0CL85 134 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 SELENOTP62341 195 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 BTN1A1Q13410 526 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 SSMEM1Q8WWF3 244 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 C22orf15Q8WYQ4 148 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 PERPQ96FX8 193 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 RNF2Q99496 336 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
HPS1-202ENST00000338546 IGKV1OR2-108A0A075B7D4 117 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 CXorf1O96002 111 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 AREGP15514 252 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 GATA3P23771 443 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 OR10J1P30954 320 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 SAA4P35542 130 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 FNDC4Q9H6D8 234 aaPredicted RBP12.94□□□□□ -0.34
HPS1-202ENST00000338546 TMEM11P17152 192 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 CYP2G1PQ6ZSU1 146 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 OR2T6Q8NHC8 308 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 SUN5Q8TC36 379 aa12.94□□□□□ -0.34
HPS1-202ENST00000338546 TCRBV4S1A1TA0A5B7 111 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 B4DSR2 109 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 MSMBP08118 114 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 FBP1P09467 338 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 CTRB1P17538 263 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
HPS1-202ENST00000338546 FXYD3Q14802 87 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 MLANAQ16655 118 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 CTRB2Q6GPI1 263 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 GATAD1Q8WUU5 269 aa12.93□□□□□ -0.34
HPS1-202ENST00000338546 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
HPS1-202ENST00000338546 TRAV20A0A0B4J274 112 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 A1L4Q6 167 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 DNASE2O00115 360 aaPredicted RBP12.92□□□□□ -0.34
HPS1-202ENST00000338546 PLXNB1O43157 2135 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 REG1AP05451 166 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 NPBWR1P48145 328 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 MFAP2P55001 183 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 LRRC75A-AS1Q8N1F1 130 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 CYB561D1Q8N8Q1 229 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 C17orf50Q8WW18 174 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 NPIPB3Q92617 1050 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 ACY3Q96HD9 319 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 MRPL32Q9BYC8 188 aaKnown RBP12.92□□□□□ -0.34
HPS1-202ENST00000338546 NAV3Q8IVL0 2385 aa12.92□□□□□ -0.34
HPS1-202ENST00000338546 MED13LQ71F56 2210 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 NPIPB5A8MRT5 1133 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 RHEBQ15382 184 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 PFDN5Q99471 154 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 TRGV9Q99603 122 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 FUT9Q9Y231 359 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 ARL2-SNX15V9GYD0 113 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 COL12A1Q99715 3063 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
HPS1-202ENST00000338546 NCBP2LA6PVI3 153 aaKnown RBP12.9□□□□□ -0.34
HPS1-202ENST00000338546 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
HPS1-202ENST00000338546 HLA-DRB1P01911 266 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 OR5G3P0C626 314 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 CD24P25063 80 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms