RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 LOC105371242A0A075B767 164 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 IGHV3-72A0A0B4J1Y9 119 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 DEFA4P12838 97 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 PAX6P26367 422 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 CDKN1AP38936 164 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 GPR6P46095 362 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-201ENST00000333617 RPL29P47914 159 aaKnown RBP7.01□□□□□ -1.29
LSAMP-201ENST00000333617 GCSAMLQ5JQS6 135 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 FAM90A2PQ658T7 463 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 OR4P4Q8NGL7 312 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 SSMEM1Q8WWF3 244 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 RPEQ96AT9 228 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 RITA1Q96K30 269 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 TUBA4BQ9H853 241 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 ABCA2Q9BZC7 2435 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 COL12A1Q99715 3063 aa7.01□□□□□ -1.29
LSAMP-201ENST00000333617 CGB1A6NKQ9 187 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 COLCA2A8K830 154 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 E7EUB6 86 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 C19orf84I3L1E1 186 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 M0R1W7 72 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 NDUFS6O75380 124 aaKnown RBP7□□□□□ -1.29
LSAMP-201ENST00000333617 IGFBP2P18065 325 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 SUB1P53999 127 aaKnown RBP eCLIP7□□□□□ -1.29
LSAMP-201ENST00000333617 CD81P60033 236 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 B2MP61769 119 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 ARF6P62330 175 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 CD69Q07108 199 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 TMEM249Q2WGJ8 235 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 TMEM144Q7Z5S9 345 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 MMD2Q8IY49 270 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 STPG3Q8N7X2 389 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 SPG11Q96JI7 2443 aa7□□□□□ -1.29
LSAMP-201ENST00000333617 A6NNC1 897 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 TMEM250H0YL14 139 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 LY6LH3BQJ8 138 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ACTL6BO94805 426 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 HTR1DP28221 377 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 MAS1LP35410 378 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 GPX4P36969 197 aaPredicted RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 EFNA4P52798 201 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 RHOBP62745 196 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 WT1-ASQ06250 92 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 PNRC1Q12796 327 aaPredicted RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 GAMTQ14353 236 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 PSG5Q15238 335 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 MRGPRG-AS1Q2M3A8 158 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 C10orf55Q5SWW7 151 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 OR11H6Q8NGC7 330 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 OR4F5Q8NH21 305 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 GATAD1Q8WUU5 269 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CACNG8Q8WXS5 425 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 SLC35E1Q96K37 410 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 OR4F4Q96R69 305 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 SIRT7Q9NRC8 400 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 MLXQ9UH92 298 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CENPEQ02224 2701 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ANKRD17O75179 2603 aaKnown RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 A0A087WWC5 75 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 A0A1W2PPI3 338 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ZNF727A8MUV8 499 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 B4DEV8 164 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 C11orf94C9JXX5 98 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 PAGE4O60829 102 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 NDUFS7O75251 213 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 OR2C1O95371 312 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CXorf1O96002 111 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 MT-ND4LP03901 98 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CRYGBP07316 175 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 STAG3L2P0CL84 134 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 STAG3L3P0CL85 134 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ARL14EPLP0DKL9 152 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 PRTN3P24158 256 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CNTFRP26992 372 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 RPL27AP46776 148 aaKnown RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 FLI1Q01543 452 aaPredicted RBP6.99□□□□□ -1.29
LSAMP-201ENST00000333617 TNXAQ16473 311 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 PRSS8Q16651 343 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 TPTE2P1Q5T6R2 138 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 SLC16A13Q7RTY0 426 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ABHD5Q8WTS1 349 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 ISOC2Q96AB3 205 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 RNF5Q99942 180 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 DPM3Q9P2X0 92 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 SLC45A2Q9UMX9 530 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
LSAMP-201ENST00000333617 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 MT-CO2P00403 227 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 CRYBA1P05813 215 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 LINC00869P0C866 280 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 FOLR2P14207 255 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 OR10J1P30954 320 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 CEACAM3P40198 252 aa6.98□□□□□ -1.29
LSAMP-201ENST00000333617 COMPP49747 757 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-201ENST00000333617 ZNF674Q2M3X9 581 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms