RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SPSB3Q6PJ21 355 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 PLET1Q6UQ28 207 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 SCARB1Q8WTV0 552 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 C21orf62Q9NYP8 219 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 PRR13Q9NZ81 148 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 PTTG2Q9NZH5 202 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 ZNF256Q9Y2P7 627 aaPredicted RBP10.7□□□□□ -0.7
LIMS1-201ENST00000332345 IGHV3-21A0A0B4J1V1 117 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 A0A1B0GU03 582 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 ZNF320A2RRD8 509 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 K7EIL1 84 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 K7EIM0 57 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 LGALS9O00182 355 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 LY86O95711 162 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 CSN3P07498 182 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 GPR183P32249 361 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 MFAP4P55083 255 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 SMCO1Q147U7 214 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 IL34Q6ZMJ4 242 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 LRTM2Q8N967 370 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 BSCL2Q96G97 398 aaPredicted RBP10.69□□□□□ -0.7
LIMS1-201ENST00000332345 TXN2Q99757 166 aa10.69□□□□□ -0.7
LIMS1-201ENST00000332345 HEYLQ9NQ87 328 aaPredicted RBP10.69□□□□□ -0.7
LIMS1-201ENST00000332345 OR2T8A6NH00 312 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 CEBPZOSA8MTT3 80 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 CORTO00230 105 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 PLA2G10O15496 165 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 LYRM1O43325 122 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 TGOLN2O43493 480 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 IGLV1-51P01701 117 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 HTR2BP41595 481 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 ANKRD55Q3KP44 614 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 Q56UQ5 140 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 NMSQ5H8A3 153 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 UBAC2Q8NBM4 344 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 HIPK2Q9H2X6 1198 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 PALMDQ9NP74 551 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 ZC4H2Q9NQZ6 224 aa10.68□□□□□ -0.7
LIMS1-201ENST00000332345 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
LIMS1-201ENST00000332345 I3L2K1 104 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 MT-CO2P00403 227 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 SPNP16150 400 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
LIMS1-201ENST00000332345 ZNF846Q147U1 533 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 OR1S1Q8NH92 325 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
LIMS1-201ENST00000332345 PRR25Q96S07 402 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 WDR12Q9GZL7 423 aaKnown RBP10.67□□□□□ -0.7
LIMS1-201ENST00000332345 FLVCR2Q9UPI3 526 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 TMED3Q9Y3Q3 217 aa10.67□□□□□ -0.7
LIMS1-201ENST00000332345 C9orf170A2RU37 121 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 C2orf70A6NJV1 201 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 NUPL2O15504 423 aaKnown RBP10.66□□□□□ -0.7
LIMS1-201ENST00000332345 OR4E1P0C645 316 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
LIMS1-201ENST00000332345 SLC25A6P12236 298 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 BTCP35070 178 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 NPBWR1P48145 328 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 C4orf46Q504U0 113 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 ZNF436Q9C0F3 470 aaPredicted RBP10.66□□□□□ -0.7
LIMS1-201ENST00000332345 HSPB7Q9UBY9 170 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 UFC1Q9Y3C8 167 aa10.66□□□□□ -0.7
LIMS1-201ENST00000332345 IGHV3-35A0A0C4DH35 117 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 GNG7O60262 68 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 CTSGP08311 255 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 FOLR2P14207 255 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 GP9P14770 177 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 CBLN1P23435 193 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 ELLP55199 621 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-201ENST00000332345 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-201ENST00000332345 BSXQ3C1V8 233 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 MZT2BQ6NZ67 158 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 DYNLRB2Q8TF09 96 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 TECRQ9NZ01 308 aaKnown RBP10.65□□□□□ -0.7
LIMS1-201ENST00000332345 U3KQ87 197 aa10.65□□□□□ -0.7
LIMS1-201ENST00000332345 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
LIMS1-201ENST00000332345 NDUFA4O00483 81 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 NXPH3O95157 252 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 IFNA21P01568 189 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 IGHV3-48P01763 117 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 TCRBP04435 133 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 HOXB5P09067 269 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 ANXA7P20073 488 aaKnown RBP10.64□□□□□ -0.71
LIMS1-201ENST00000332345 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
LIMS1-201ENST00000332345 DHRS2Q13268 280 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 LYG2Q86SG7 212 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 DTD1Q8TEA8 209 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 MARC2Q969Z3 335 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 CHRDL1Q9BU40 450 aa10.64□□□□□ -0.71
LIMS1-201ENST00000332345 RBKSQ9H477 322 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms