RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ZNF114Q8NC26 417 aa18.41■□□□□ 0.54
PPP4R4-202ENST00000328839 GINS3Q9BRX5 216 aa18.41■□□□□ 0.54
PPP4R4-202ENST00000328839 FBXL17Q9UF56 701 aa18.41■□□□□ 0.54
PPP4R4-202ENST00000328839 IGKV1-39P01597 117 aa18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 IGKV1D-39P04432 117 aa18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 NANOS2P60321 138 aaKnown RBP18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 ERHP84090 104 aaKnown RBP18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 SPINK9Q5DT21 86 aa18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 OR11H2Q8NH07 326 aa18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 GPX8Q8TED1 209 aa18.4■□□□□ 0.54
PPP4R4-202ENST00000328839 SMIM31A0A1B0GVY4 71 aa18.39■□□□□ 0.53
PPP4R4-202ENST00000328839 SNX29P2Q8IUI4 249 aa18.39■□□□□ 0.53
PPP4R4-202ENST00000328839 C11orf45Q8TAV5 145 aa18.39■□□□□ 0.53
PPP4R4-202ENST00000328839 COMMD3Q9UBI1 195 aa18.39■□□□□ 0.53
PPP4R4-202ENST00000328839 DNASE2O00115 360 aaPredicted RBP18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 ST8SIA3O43173 380 aa18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 CA1P00915 261 aaPredicted RBP18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 HSPE1P61604 102 aaKnown RBP18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 RPL11P62913 178 aaKnown RBP18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 RBMS2Q15434 407 aaKnown RBP18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 FAM90A2PQ658T7 463 aa18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 LGALS9CQ6DKI2 356 aa18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 TOMM20LQ6UXN7 152 aa18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 ST8SIA2Q92186 375 aa18.38■□□□□ 0.53
PPP4R4-202ENST00000328839 IGHV3-66A0A0C4DH42 116 aa18.37■□□□□ 0.53
PPP4R4-202ENST00000328839 IZUMO4Q1ZYL8 232 aa18.37■□□□□ 0.53
PPP4R4-202ENST00000328839 YIPF6Q96EC8 236 aa18.37■□□□□ 0.53
PPP4R4-202ENST00000328839 MFFQ9GZY8 342 aa18.37■□□□□ 0.53
PPP4R4-202ENST00000328839 VCX3AQ9NNX9 186 aa18.37■□□□□ 0.53
PPP4R4-202ENST00000328839 DEFB4AO15263 64 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 APOHP02749 345 aaPredicted RBP18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 IFNA4P05014 189 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 CD5P06127 495 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 RCVRNP35243 200 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 SNCAP37840 140 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 NPBWR1P48145 328 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 LEMD1Q68G75 181 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 DUSP18Q8NEJ0 188 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 MS4A6AQ9H2W1 248 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 C11orf68Q9H3H3 251 aaKnown RBP18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 SCPEP1Q9HB40 452 aa18.36■□□□□ 0.53
PPP4R4-202ENST00000328839 DFFBO76075 338 aa18.35■□□□□ 0.53
PPP4R4-202ENST00000328839 UCP3P55916 312 aa18.35■□□□□ 0.53
PPP4R4-202ENST00000328839 SLC35G3Q8N808 338 aa18.35■□□□□ 0.53
PPP4R4-202ENST00000328839 PUS1Q9Y606 427 aaKnown RBP eCLIP18.35■□□□□ 0.53
PPP4R4-202ENST00000328839 M0QYG6 137 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 APOA1P02647 267 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 PGAM2P15259 253 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 DEFB131AP59861 70 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 TMEM187Q14656 261 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 ZNF600Q6ZNG1 722 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 LILRB2Q8N423 598 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 VSIRQ9H7M9 311 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 RABAC1Q9UI14 185 aa18.34■□□□□ 0.53
PPP4R4-202ENST00000328839 AKR1C2P52895 323 aa18.33■□□□□ 0.52
PPP4R4-202ENST00000328839 RNASE12Q5GAN4 147 aaKnown RBP18.33■□□□□ 0.52
PPP4R4-202ENST00000328839 ZFAND3Q9H8U3 227 aa18.33■□□□□ 0.52
PPP4R4-202ENST00000328839 IFNA17P01571 189 aa18.32■□□□□ 0.52
PPP4R4-202ENST00000328839 PI3P19957 117 aa18.32■□□□□ 0.52
PPP4R4-202ENST00000328839 PDCD10Q9BUL8 212 aa18.32■□□□□ 0.52
PPP4R4-202ENST00000328839 STHQ8IWL8 128 aa18.31■□□□□ 0.52
PPP4R4-202ENST00000328839 FAM24BQ8N5W8 94 aa18.31■□□□□ 0.52
PPP4R4-202ENST00000328839 TMEM231Q9H6L2 316 aa18.31■□□□□ 0.52
PPP4R4-202ENST00000328839 A0A087WXM4 84 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 HPGDSO60760 199 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 IGKV1-5P01602 117 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 ELK1P19419 428 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 HOXA1P49639 335 aaPredicted RBP18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 PIGPP57054 158 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 NCS1P62166 190 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 C2CD4CQ8TF44 421 aa18.3■□□□□ 0.52
PPP4R4-202ENST00000328839 AGRNO00468 2067 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 A0A1B0GU03 582 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 TMEM50AO95807 157 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 NPPCP23582 126 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 SUB1P53999 127 aaKnown RBP eCLIP18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 STXBP6Q8NFX7 210 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 TP53RKQ96S44 253 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 ENY2Q9NPA8 101 aa18.29■□□□□ 0.52
PPP4R4-202ENST00000328839 TRAV2A0A0B4J234 112 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 A0A0B4J293 547 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 FAM25AB3EWG3 89 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 FAM25CB3EWG5 89 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 FAM25GB3EWG6 89 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 CORTO00230 105 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 ETV6P41212 452 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 RND3P61587 244 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 VBP1P61758 197 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 TRIM16LQ309B1 348 aa18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 RNASE10Q5GAN6 216 aaKnown RBP18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 ZNF486Q96H40 463 aaPredicted RBP18.28■□□□□ 0.52
PPP4R4-202ENST00000328839 ATG12O94817 140 aa18.27■□□□□ 0.52
PPP4R4-202ENST00000328839 OPRK1P41145 380 aa18.27■□□□□ 0.52
PPP4R4-202ENST00000328839 PPP5CP53041 499 aa18.27■□□□□ 0.52
PPP4R4-202ENST00000328839 RNASE11Q8TAA1 199 aaKnown RBP18.27■□□□□ 0.52
PPP4R4-202ENST00000328839 METTL26Q96S19 204 aa18.27■□□□□ 0.52
PPP4R4-202ENST00000328839 C3orf85A0A1B0GTC6 90 aa18.26■□□□□ 0.51
PPP4R4-202ENST00000328839 A0A1W2PS18 150 aa18.26■□□□□ 0.51
PPP4R4-202ENST00000328839 RNASE2P10153 161 aaKnown RBP18.26■□□□□ 0.51
PPP4R4-202ENST00000328839 TMEM230Q96A57 120 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms