RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ZNRF1Q8ND25 227 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 OR4S2Q8NH73 311 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF430Q9H8G1 570 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-201ENST00000317716 TCFL5Q9UL49 500 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 WDFY3Q8IZQ1 3526 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 PRR19A6NJB7 356 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
CDHR3-201ENST00000317716 MOSP00540 346 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 OR9G9P0C7N8 305 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF718Q3SXZ3 478 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 MOB3BQ86TA1 216 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 MOGAT3Q86VF5 341 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 OR13A1Q8NGR1 328 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 RNF115Q9Y4L5 304 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 OR51B2Q9Y5P1 312 aa6.29□□□□□ -1.4
CDHR3-201ENST00000317716 PLXNB1O43157 2135 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 CENPEQ02224 2701 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 TRAV3A0A0B4J244 114 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 NKX2-8O15522 239 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 KLF7O75840 302 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-201ENST00000317716 PRRX1P54821 245 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 PEAR1Q5VY43 1037 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-201ENST00000317716 THYN1Q9P016 225 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 CFAP47Q6ZTR5 3102 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 COL8A2P25067 703 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 C10orf113Q5VZT2 155 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF441Q8N8Z8 693 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 NFAM1Q8NET5 270 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-201ENST00000317716 TMEM45BQ96B21 275 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 CDC42EP3Q9UKI2 254 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 J3QR89 54 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 IL18BPO95998 194 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 CRYGSP22914 178 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 HES1Q14469 280 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 MLANAQ16655 118 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF585BQ52M93 769 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 SLC35E4Q6ICL7 350 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 C19orf35Q6ZS72 473 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 AGMATQ9BSE5 352 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 KIAA1549LQ6ZVL6 1849 aa6.28□□□□□ -1.4
CDHR3-201ENST00000317716 TRGV10A0A0A0MS01 117 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 A0A1W2PS18 150 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 J3KRW8 73 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 IL11RAQ14626 422 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 BHLHA15Q7RTS1 189 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-201ENST00000317716 HARBI1Q96MB7 349 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 TIMM9Q9Y5J7 89 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 A6NDN8 102 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 CORTO00230 105 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 NPPCP23582 126 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 CSN1S1P47710 185 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 EFNB3Q15768 340 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 OR2M7Q8NG81 312 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 OR9G1Q8NH87 305 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 NPIPB3Q92617 1050 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-201ENST00000317716 REPIN1Q9BWE0 567 aaKnown RBP6.27□□□□□ -1.41
CDHR3-201ENST00000317716 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 COL12A1Q99715 3063 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 C7orf71A4D174 169 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 PSPNO60542 156 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 HLA-DRB1P01911 266 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 PRDX2P32119 198 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 PCOLCEQ15113 449 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 PLA2G2CQ5R387 149 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 C1orf185Q5T7R7 199 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 PCSK4Q6UW60 755 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 TREML4Q6UXN2 200 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 FAM222BQ8WU58 562 aa6.27□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF703Q9H7S9 590 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-201ENST00000317716 RALYQ9UKM9 306 aaKnown RBP6.27□□□□□ -1.41
CDHR3-201ENST00000317716 LY6G6EA0A0G2JKS1 128 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 KLRC4-KLRK1H3BQV0 150 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 MEOX1P50221 254 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 SUB1P53999 127 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 ZFP36L1Q07352 338 aaKnown RBP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 FOXL1Q12952 345 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 SRSF12Q8WXF0 261 aaKnown RBP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 GGTLC1Q9BX51 225 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 WDR83OSQ9Y284 106 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 U3KQA8 63 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 C8orf88P0DMB2 117 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 NTF4P34130 210 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 NBL1P41271 181 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 TSKUQ8WUA8 353 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms