RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 TMEM189A5PLL7 270 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 CCL2P13500 99 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 GATA3P23771 443 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 OR2H1Q9GZK4 316 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 VWC2LB2RUY7 222 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 NPIPB11E5RHQ5 1161 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 J3QR89 54 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 NCR2O95944 276 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 ZNF137PP52743 207 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 WFDC2Q14508 124 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 RTL8BQ17RB0 113 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 SH2D2AQ9NP31 389 aa13.33□□□□□ -0.28
SOX30-202ENST00000311371 FGF6P10767 208 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 SHISA2Q6UWI4 295 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 PLPPR2Q96GM1 343 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 C1orf159Q96HA4 380 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 IDI2-AS1Q9NZ38 188 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 ZNF645Q8N7E2 425 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 LINC00470Q9BZP3 86 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
SOX30-202ENST00000311371 A1L4Q6 167 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 ZIC3O60481 467 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
SOX30-202ENST00000311371 CER1O95813 267 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 OR9G9P0C7N8 305 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 CATR1Q13166 79 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 LINC01545Q5VT33 79 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 MBD6Q96DN6 1003 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 HSD17B10Q99714 261 aaKnown RBP13.31□□□□□ -0.28
SOX30-202ENST00000311371 OR5AL1P0C617 328 aa13.31□□□□□ -0.28
SOX30-202ENST00000311371 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
SOX30-202ENST00000311371 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
SOX30-202ENST00000311371 F11RQ9Y624 299 aaKnown RBP13.31□□□□□ -0.28
SOX30-202ENST00000311371 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 TMEM167BQ9NRX6 74 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 A0A1W2PQF6 199 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 YPEL5P62699 121 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 Q6ZS52 159 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
SOX30-202ENST00000311371 ETDBQ3ZM63 59 aa13.29□□□□□ -0.28
SOX30-202ENST00000311371 TIMM23BQ5SRD1 257 aa13.29□□□□□ -0.28
SOX30-202ENST00000311371 TEPPQ6URK8 271 aa13.29□□□□□ -0.28
SOX30-202ENST00000311371 BOKQ9UMX3 212 aaPredicted RBP13.29□□□□□ -0.28
SOX30-202ENST00000311371 VKORC1L1Q8N0U8 176 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 MTURNQ8N3F0 131 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 ZNF503Q96F45 646 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 COL5A1P20908 1838 aaPredicted RBP13.28□□□□□ -0.28
SOX30-202ENST00000311371 K7ERJ3 54 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 IGHV3-7P01780 117 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 SMIM13P0DJ93 91 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 HBBP68871 147 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 C9orf135Q5VTT2 229 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 OR4A16Q8NH70 328 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 VGLL1Q99990 258 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 LSM4Q9Y4Z0 139 aaKnown RBP13.28□□□□□ -0.28
SOX30-202ENST00000311371 WDFY3Q8IZQ1 3526 aa13.28□□□□□ -0.28
SOX30-202ENST00000311371 KBTBD11-OT1A0A1B0GTJ5 212 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 LINC00473A8K010 186 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 FAM87AP0C7U9 286 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 INSL3P51460 131 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 KRTAP27-1Q3LI81 207 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 OR10D3Q8NH80 312 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 ZNF479Q96JC4 524 aa13.27□□□□□ -0.28
SOX30-202ENST00000311371 MRPL16Q9NX20 251 aaKnown RBP13.27□□□□□ -0.28
SOX30-202ENST00000311371 IGHV3-64DA0A0J9YX35 117 aa13.27□□□□□ -0.29
SOX30-202ENST00000311371 IGHV3-9P01782 118 aa13.27□□□□□ -0.29
SOX30-202ENST00000311371 SGK494Q96LW2 274 aa13.27□□□□□ -0.29
SOX30-202ENST00000311371 C18orf15Q96N68 181 aa13.27□□□□□ -0.29
SOX30-202ENST00000311371 FOXB1Q99853 325 aa13.27□□□□□ -0.29
SOX30-202ENST00000311371 A0A1B0GXF2 115 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 B4GALT7Q9UBV7 327 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 MPC1Q9Y5U8 109 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 SMAD7O15105 426 aaKnown RBP13.26□□□□□ -0.29
SOX30-202ENST00000311371 MT-CO3P00414 261 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 CYC1P08574 325 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 GCSHP23434 173 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 MRPS21P82921 87 aaKnown RBP13.26□□□□□ -0.29
SOX30-202ENST00000311371 ZNF497Q6ZNH5 498 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 MOB1BQ7L9L4 216 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 ANKRD37Q7Z713 158 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 ABHD17AQ96GS6 310 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 PGLYRP4Q96LB8 373 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 INSIG2Q9Y5U4 225 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 NCKAP5O14513 1909 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 NCOR1O75376 2440 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 BOD1L2Q8IYS8 172 aa13.26□□□□□ -0.29
SOX30-202ENST00000311371 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms