RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
COL3A1-201ENST00000304636 GCSAMLQ5JQS6 135 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 PRSS8Q16651 343 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 MORN2Q502X0 79 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 RPP25LQ8N5L8 163 aaKnown RBP10.74□□□□□ -0.69
COL3A1-201ENST00000304636 KNTC1P50748 2209 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
COL3A1-201ENST00000304636 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
COL3A1-201ENST00000304636 SAA2-SAA4A0A096LPE2 208 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 C9JCJ5 164 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 SAA2P0DJI9 122 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 MRPL20Q9BYC9 149 aaKnown RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 IGHV1-69-2A0A0G2JMI3 117 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 OR9G9P0C7N8 305 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 ATP5G2Q06055 141 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 KLRB1Q12918 225 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 EEF1AKMT3Q96AZ1 226 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 SEC11AP67812 179 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 LDLRAD2Q5SZI1 272 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 LOC102723996A0A087X1L8 192 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 DUTP33316 252 aaKnown RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 GNG5P63218 68 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 DYNLRB2Q8TF09 96 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 NABP1Q96AH0 204 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 FNDC4Q9H6D8 234 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-201ENST00000304636 LINC00312Q9Y6C7 94 aa10.73□□□□□ -0.69
COL3A1-201ENST00000304636 IGKV1-27A0A075B6S5 117 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 IGHV2OR16-5A0A0B4J2B6 119 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 ZNF418Q8TF45 676 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-201ENST00000304636 ORAOV1Q8WV07 137 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 LOXL4Q96JB6 756 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 ZNF664Q8N3J9 261 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 ELOVL5Q9NYP7 299 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 CCL21O00585 134 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 EFEMP2O95967 443 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 PF4V1P10720 104 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 TMEM14EPQ6UXP3 125 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 TCRBV4S1A1TA0A5B7 111 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 HBDP02042 147 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 PRCDQ00LT1 54 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 SLX1AQ9BQ83 275 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 FOXA2Q9Y261 457 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-201ENST00000304636 CABIN1Q9Y6J0 2220 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
COL3A1-201ENST00000304636 EFNA2O43921 213 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 IGHV1-2P23083 117 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 CD69Q07108 199 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 STPG1Q5TH74 334 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 GZMBP10144 247 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 TMEM170BQ5T4T1 132 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 SPOCK3Q9BQ16 436 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 LPAR2Q9HBW0 351 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 PNRC2Q9NPJ4 139 aaKnown RBP10.71□□□□□ -0.69
COL3A1-201ENST00000304636 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 LHX2P50458 406 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 HGFACQ04756 655 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 TMEM256Q8N2U0 113 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 FBXL15Q9H469 300 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
COL3A1-201ENST00000304636 TDRD6O60522 2096 aaKnown RBP10.71□□□□□ -0.7
COL3A1-201ENST00000304636 FAM181BA6NEQ2 426 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.7
COL3A1-201ENST00000304636 UMODP07911 640 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 TSPOP30536 169 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 ZIC4Q8N9L1 334 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 CELA3BP08861 270 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 LEPP41159 167 aa10.71□□□□□ -0.7
COL3A1-201ENST00000304636 LOC105371242A0A075B767 164 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 PYYP10082 97 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 BEX4Q9NWD9 120 aaPredicted RBP10.7□□□□□ -0.7
COL3A1-201ENST00000304636 TSPAN13O95857 204 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 CLPSP04118 112 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 FHL1Q13642 323 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 ZNF56Q15929 161 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 MUC21A0A0G2JKD1 596 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 MUC21A0A140T8X8 626 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 IGKV1-5P01602 117 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 RNFT1Q5M7Z0 435 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 FAM90A2PQ658T7 463 aa10.7□□□□□ -0.7
COL3A1-201ENST00000304636 C9JQL5 133 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms