RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 EXOSC2Q13868 293 aaKnown RBP16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 PVRIGQ6DKI7 326 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 C19orf35Q6ZS72 473 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 TTC9CQ8N5M4 171 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 HSD17B11Q8NBQ5 300 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 TMEM68Q96MH6 324 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 ARV1Q9H2C2 271 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 IGHG2P01859 326 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 SRD5A1P18405 259 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 OPRK1P41145 380 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 MFAP2P55001 183 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 ECSCRQ19T08 205 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 UNQ5815/PRO19632Q6UWF5 114 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 SLC35E3Q7Z769 313 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 SCGB1C1Q8TD33 95 aa16.33■□□□□ 0.21
PACSIN3-201ENST00000298838 HIVEP1P15822 2718 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 SMCO3A2RU48 225 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 LINC01548A6NM66 108 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 CD69Q07108 199 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 EIF5AL1Q6IS14 154 aaKnown RBP16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 ALKAL2Q6UX46 152 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 MISP3Q96FF7 219 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 GINS3Q9BRX5 216 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 PARD6GQ9BYG4 376 aaPredicted RBP16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 MTORP42345 2549 aa16.33■□□□□ 0.2
PACSIN3-201ENST00000298838 FNDC10F2Z333 226 aa16.32■□□□□ 0.2
PACSIN3-201ENST00000298838 AKIRIN2Q53H80 203 aa16.32■□□□□ 0.2
PACSIN3-201ENST00000298838 CACNG8Q8WXS5 425 aa16.32■□□□□ 0.2
PACSIN3-201ENST00000298838 WDR61Q9GZS3 305 aaKnown RBP16.32■□□□□ 0.2
PACSIN3-201ENST00000298838 CYB5BO43169 146 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 GPX4P36969 197 aaPredicted RBP16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 CRIP2P52943 208 aaPredicted RBP16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 ARSJQ5FYB0 599 aaPredicted RBP16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 SLC16A13Q7RTY0 426 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 UBQLN2Q9UHD9 624 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 DMRT1Q9Y5R6 373 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 IGF1P05019 195 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 AKR1C1Q04828 323 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 ETFRF1Q6IPR1 90 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 FAM110DQ8TAY7 271 aaPredicted RBP16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 TMED6Q8WW62 240 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 GNPNAT1Q96EK6 184 aaPredicted RBP16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 DUX5Q96PT3 197 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 NPFFR1Q9GZQ6 430 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 NPVFQ9HCQ7 196 aa16.31■□□□□ 0.2
PACSIN3-201ENST00000298838 TRAV41A0A0B4J266 112 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 TSPAN9O75954 239 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 ATP6V0CP27449 155 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 TREML4Q6UXN2 200 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 OR5T1Q8NG75 326 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 SCARB1Q8WTV0 552 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 TAF15Q92804 592 aaKnown RBP eCLIP16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 SLC35E1Q96K37 410 aa16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 FNDC4Q9H6D8 234 aaPredicted RBP16.3■□□□□ 0.2
PACSIN3-201ENST00000298838 RPS10-NUDT3A0A1W2PQS6 291 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 G3V318 75 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 AP4M1O00189 453 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 PRH1P02810 166 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 FGF7P21781 194 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 RUNX1Q01196 453 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 Q6ZS46 218 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 SH3BGRL3Q9H299 93 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 SLC25A32Q9H2D1 315 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 WDR83OSQ9Y284 106 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 DNAJC9-AS1A6NH13 148 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 SEC11BP0C7V7 166 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 SPP1P10451 314 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 GAMTQ14353 236 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 BTNL8Q6UX41 500 aa16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 Q71RC1 249 aaPredicted RBP16.29■□□□□ 0.2
PACSIN3-201ENST00000298838 IGLV11-55A0A075B6I3 123 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 TRIM77I1YAP6 450 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 MPDU1O75352 247 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 MT-CO2P00403 227 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 MDKP21741 143 aaPredicted RBP16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 MLANAQ16655 118 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 PRSS22Q9GZN4 317 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 GSX1Q9H4S2 264 aaPredicted RBP16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 THYN1Q9P016 225 aa16.28■□□□□ 0.2
PACSIN3-201ENST00000298838 C19orf54Q5BKX5 351 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 TEPPQ6URK8 271 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 FANCD2OSQ96PS1 177 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 RSG1Q9BU20 258 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 LINC00527Q9UJ94 153 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 ZNF580Q9UK33 172 aa16.27■□□□□ 0.2
PACSIN3-201ENST00000298838 HIST1H1BP16401 226 aaKnown RBP16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 FAM74A1Q5RGS3 127 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 TMEM144Q7Z5S9 345 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 OR2T6Q8NHC8 308 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 ZNF418Q8TF45 676 aaPredicted RBP16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 ACY3Q96HD9 319 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 NPCDR1Q9BY65 106 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 LSM4Q9Y4Z0 139 aaKnown RBP16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 INAFM1C9JVW0 142 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 CLDN34H7C241 214 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 I3L2K1 104 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 IGHV3-48P01763 117 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 ZNF709Q8N972 641 aa16.26■□□□□ 0.19
PACSIN3-201ENST00000298838 OR2G3Q8NGZ4 309 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms