RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 CMC4P56277 68 aaPredicted RBP14.45□□□□□ -0.1
CXCL3-201ENST00000296026 HSPE1P61604 102 aaKnown RBP14.45□□□□□ -0.1
CXCL3-201ENST00000296026 CMTM3Q96MX0 182 aa14.45□□□□□ -0.1
CXCL3-201ENST00000296026 CSTL1Q9H114 145 aa14.45□□□□□ -0.1
CXCL3-201ENST00000296026 ERHP84090 104 aaKnown RBP14.44□□□□□ -0.1
CXCL3-201ENST00000296026 FAM90A2PQ658T7 463 aa14.44□□□□□ -0.1
CXCL3-201ENST00000296026 GBGT1Q8N5D6 347 aa14.44□□□□□ -0.1
CXCL3-201ENST00000296026 MPTX1A8MV57 137 aa14.43□□□□□ -0.1
CXCL3-201ENST00000296026 NCS1P62166 190 aa14.43□□□□□ -0.1
CXCL3-201ENST00000296026 GINS3Q9BRX5 216 aa14.43□□□□□ -0.1
CXCL3-201ENST00000296026 M0QYG6 137 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 ELK1P19419 428 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 IZUMO4Q1ZYL8 232 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 SPINK9Q5DT21 86 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 TCF24Q7RTU0 167 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 GATAD1Q8WUU5 269 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 PHLDA1Q8WV24 401 aaPredicted RBP14.42□□□□□ -0.1
CXCL3-201ENST00000296026 RARRES2Q99969 163 aa14.42□□□□□ -0.1
CXCL3-201ENST00000296026 HPGDSO60760 199 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 VBP1P61758 197 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 PAFAH1B2P68402 229 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 TOMM20LQ6UXN7 152 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 DUSP18Q8NEJ0 188 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 FUNDC2Q9BWH2 189 aa14.41□□□□□ -0.1
CXCL3-201ENST00000296026 TNFAIP8O95379 198 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 CD5P06127 495 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 PGAM2P15259 253 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 PI3P19957 117 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 SNCAP37840 140 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 NPBWR1P48145 328 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 ST8SIA2Q92186 375 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 VSIRQ9H7M9 311 aa14.4□□□□□ -0.1
CXCL3-201ENST00000296026 ST8SIA3O43173 380 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 IGKV1-5P01602 117 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 APOHP02749 345 aaPredicted RBP14.39□□□□□ -0.11
CXCL3-201ENST00000296026 RND3P61587 244 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 RNASE12Q5GAN4 147 aaKnown RBP14.39□□□□□ -0.11
CXCL3-201ENST00000296026 ZNF600Q6ZNG1 722 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 LILRB2Q8N423 598 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
CXCL3-201ENST00000296026 TP53RKQ96S44 253 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 ZFAND3Q9H8U3 227 aa14.39□□□□□ -0.11
CXCL3-201ENST00000296026 PUS1Q9Y606 427 aaKnown RBP eCLIP14.39□□□□□ -0.11
CXCL3-201ENST00000296026 A0A0B4J293 547 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 IGHV3-66A0A0C4DH42 116 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 DNASE2O00115 360 aaPredicted RBP14.38□□□□□ -0.11
CXCL3-201ENST00000296026 DFFBO76075 338 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 AKR1C2P52895 323 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 PIGPP57054 158 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 RNASE10Q5GAN6 216 aaKnown RBP14.38□□□□□ -0.11
CXCL3-201ENST00000296026 RPP25LQ8N5L8 163 aaKnown RBP14.38□□□□□ -0.11
CXCL3-201ENST00000296026 OR11H2Q8NH07 326 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 MS4A6AQ9H2W1 248 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 KLK11Q9UBX7 282 aa14.38□□□□□ -0.11
CXCL3-201ENST00000296026 A0A1B0GU03 582 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 FAM25AB3EWG3 89 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 FAM25CB3EWG5 89 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 FAM25GB3EWG6 89 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 INS-IGF2F8WCM5 200 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 TMEM50AO95807 157 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 IFNA17P01571 189 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 P0C879 139 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 RORCP51449 518 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 DEFB131AP59861 70 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 RPL11P62913 178 aaKnown RBP14.37□□□□□ -0.11
CXCL3-201ENST00000296026 LEMD1Q68G75 181 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 LHFPL1Q86WI0 220 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 PDCD10Q9BUL8 212 aa14.37□□□□□ -0.11
CXCL3-201ENST00000296026 C3orf85A0A1B0GTC6 90 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 ATG12O94817 140 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 CA1P00915 261 aaPredicted RBP14.36□□□□□ -0.11
CXCL3-201ENST00000296026 CD3DP04234 171 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 RNASE2P10153 161 aaKnown RBP14.36□□□□□ -0.11
CXCL3-201ENST00000296026 SUB1P53999 127 aaKnown RBP eCLIP14.36□□□□□ -0.11
CXCL3-201ENST00000296026 NANOS2P60321 138 aaKnown RBP14.36□□□□□ -0.11
CXCL3-201ENST00000296026 PVRIGQ6DKI7 326 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 MZT2AQ6P582 158 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 ARRDC1Q8N5I2 433 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 C11orf45Q8TAV5 145 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 MFFQ9GZY8 342 aa14.36□□□□□ -0.11
CXCL3-201ENST00000296026 C11orf68Q9H3H3 251 aaKnown RBP14.36□□□□□ -0.11
CXCL3-201ENST00000296026 CORTO00230 105 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 ETV6P41212 452 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 HOXA1P49639 335 aaPredicted RBP14.35□□□□□ -0.11
CXCL3-201ENST00000296026 PPP5CP53041 499 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 LGALS9CQ6DKI2 356 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 FAM24BQ8N5W8 94 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 OR52I2Q8NH67 350 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 TMEM231Q9H6L2 316 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 FBXL17Q9UF56 701 aa14.35□□□□□ -0.11
CXCL3-201ENST00000296026 TRAV2A0A0B4J234 112 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 DEDDO75618 318 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 NPPCP23582 126 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 TMEM187Q14656 261 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 RBMS2Q15434 407 aaKnown RBP14.34□□□□□ -0.11
CXCL3-201ENST00000296026 TRIM16LQ309B1 348 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 SP6Q3SY56 376 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 FNDC4Q9H6D8 234 aaPredicted RBP14.34□□□□□ -0.11
CXCL3-201ENST00000296026 MRPL36Q9P0J6 103 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms