RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TMEM187Q14656 261 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF600Q6ZNG1 722 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 TRAF4Q9BUZ4 470 aaPredicted RBP12.43□□□□□ -0.42
CCDC6-201ENST00000263102 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 SDHCQ99643 169 aaPredicted RBP12.43□□□□□ -0.42
CCDC6-201ENST00000263102 IGHV1-18A0A0C4DH31 117 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
CCDC6-201ENST00000263102 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
CCDC6-201ENST00000263102 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 SCN9AQ15858 1988 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 GCM2O75603 506 aaPredicted RBP12.42□□□□□ -0.42
CCDC6-201ENST00000263102 FCN3O75636 299 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 DAD1P61803 113 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 CIARTQ8N365 385 aaPredicted RBP12.42□□□□□ -0.42
CCDC6-201ENST00000263102 LAMB1P07942 1786 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 ITGB4P16144 1822 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 PSPNO60542 156 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 HOXD3P31249 432 aaPredicted RBP12.42□□□□□ -0.42
CCDC6-201ENST00000263102 FOXF2Q12947 444 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 IMMP2LQ96T52 175 aa12.42□□□□□ -0.42
CCDC6-201ENST00000263102 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF474Q6S9Z5 364 aaPredicted RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ASCL2Q99929 193 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 TRAV8-2A0A0B4J237 113 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 CA7P43166 264 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 C9orf62Q8N4C0 152 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF625Q96I27 306 aaPredicted RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 TMEM126AQ9H061 195 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 TRBV5-5A0A0J9YX44 114 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 IQCF6A8MYZ5 107 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 MLNRO43193 412 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 HIST1H4AP62805 103 aaKnown RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 FUT5Q11128 374 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 C6orf226Q5I0X4 101 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 J3QW42 95 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 RND3P61587 244 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ORMDL3Q8N138 153 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF525Q8N782 197 aa12.41□□□□□ -0.42
CCDC6-201ENST00000263102 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF345Q14585 488 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 DTX1Q86Y01 620 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 ZNF48Q96MX3 618 aaPredicted RBP12.4□□□□□ -0.42
CCDC6-201ENST00000263102 C5orf66Q9H5L9 145 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
CCDC6-201ENST00000263102 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
CCDC6-201ENST00000263102 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 APCDD1LQ8NCL9 501 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
CCDC6-201ENST00000263102 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
CCDC6-201ENST00000263102 ADAMTSL3P82987 1691 aa12.4□□□□□ -0.43
CCDC6-201ENST00000263102 OVOL1O14753 267 aa12.4□□□□□ -0.43
CCDC6-201ENST00000263102 RUSC1-AS1Q66K80 236 aa12.4□□□□□ -0.43
CCDC6-201ENST00000263102 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.43
CCDC6-201ENST00000263102 A0A0G2JK05 382 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 MBD3L4A6NDZ8 208 aaPredicted RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 MBD3L3A6NE82 208 aaPredicted RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 MBD3L5A6NJ08 208 aaPredicted RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 ZNF561-AS1K7EIQ3 104 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 CCL1P22362 96 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 SRSF6Q13247 344 aaKnown RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 MBD3L2Q8NHZ7 208 aaPredicted RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 NEUROG1Q92886 237 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 C1orf159Q96HA4 380 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 LIMS1P48059 325 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 C2orf68Q2NKX9 166 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 STPG2Q8N412 459 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 VIRMAQ69YN4 1812 aaKnown RBP12.39□□□□□ -0.43
CCDC6-201ENST00000263102 LY6HO94772 140 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 ATP5G3P48201 142 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 NR2C2APQ86WQ0 139 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
CCDC6-201ENST00000263102 ERCC8Q13216 396 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 IGHMP01871 453 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 SSBP4Q9BWG4 385 aaPredicted RBP12.38□□□□□ -0.43
CCDC6-201ENST00000263102 TJP1Q07157 1748 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 UPK2O00526 184 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 CD59P13987 128 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 CXCL2P19875 107 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
CCDC6-201ENST00000263102 TRAV13-1A0A0B4J241 112 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 PYYP10082 97 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 HAPLN4Q86UW8 402 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 SS18Q15532 418 aa12.38□□□□□ -0.43
CCDC6-201ENST00000263102 CACNA1CQ13936 2221 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 PINLYPA6NC86 204 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 SLC25A16P16260 332 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms