RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 LOC105371267A0A1B0GV96 52 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 TSC22D2O75157 780 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 LY86O95711 162 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 PET100P0DJ07 73 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 PSMB8P28062 276 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 DEFA5Q01523 94 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 FGL1Q08830 312 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 FOXL1Q12952 345 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
CCDC90B-201ENST00000260054 E5RGE8 158 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 H3BUA1 57 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 PF4V1P10720 104 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 LYL1P12980 280 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 RPL23AP62750 156 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 KLK9Q2XQG4 91 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 PVRIGQ6DKI7 326 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 SLC25A24Q6NUK1 477 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 TEX38Q6PEX7 206 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 LYRM2Q9NU23 88 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 KLK9Q9UKQ9 250 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 STRAPQ9Y3F4 350 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 TRBV9A0A0B4J1U6 114 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 A0A1B0GUS0 222 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 FAM24AA6NFZ4 105 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 CAV2P51636 162 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 SUB1P53999 127 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 TEX261Q6UWH6 196 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 THAP6Q8TBB0 222 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 C19orf24Q9BVV8 132 aa12.32□□□□□ -0.44
CCDC90B-201ENST00000260054 OR2J3O76001 311 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 BRI3O95415 125 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 ELANEP08246 267 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 RAB9AP51151 201 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 RHOGP84095 191 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 FOXE3Q13461 319 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 TOR2AQ5JU69 321 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 TMEM14EPQ6UXP3 125 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 MISP3Q96FF7 219 aa12.31□□□□□ -0.44
CCDC90B-201ENST00000260054 IGSF23A1L1A6 192 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 NDUFB8O95169 186 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 TRGV3P03979 118 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 SLC25A4P12235 298 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 P2RY1P47900 373 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 ATP5IP56385 69 aaPredicted RBP12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 TPPP2P59282 170 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 COMMD1Q8N668 190 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 TMEM252Q8N6L7 170 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 RNF152Q8N8N0 203 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 ZNF680Q8NEM1 530 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 FBXL7Q9UJT9 491 aa12.3□□□□□ -0.44
CCDC90B-201ENST00000260054 PMS2P5A8MQ11 134 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 IFNA4P05014 189 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 HIST1H1BP16401 226 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 CLLU1Q5K131 121 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 ETV3LQ6ZN32 361 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 C11orf44Q8N8P7 122 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 OR4X2Q8NGF9 303 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 MYOZ3Q8TDC0 251 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 FXYD6-FXYD2A0A087WZ82 144 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 I3L2K1 104 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 K7EIM0 57 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 CYB5BO43169 146 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 IFNA7P01567 189 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 CD28P10747 220 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 RAB11AP62491 216 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 MLANAQ16655 118 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 OR8G2PQ6IF36 304 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 HAPLN4Q86UW8 402 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 NECAP1Q8NC96 275 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 LRRC20Q8TCA0 184 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 WFDC12Q8WWY7 111 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 THYN1Q9P016 225 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 S4R3C0 116 aa12.29□□□□□ -0.44
CCDC90B-201ENST00000260054 MFSD2BA6NFX1 497 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 FAM223BA6NKX1 122 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 CORTO00230 105 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 CST7O76096 145 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 MT-CO2P00403 227 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms