RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 IGKV1-16P04430 117 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 MDS2Q8NDY4 140 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 GSX1Q9H4S2 264 aaPredicted RBP11.35□□□□□ -0.59
NCLN-201ENST00000246117 SEBOXQ9HB31 216 aaPredicted RBP11.35□□□□□ -0.59
NCLN-201ENST00000246117 COL6A3P12111 3177 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 ZFYVE26Q68DK2 2539 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
NCLN-201ENST00000246117 TIMP3P35625 211 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 LINC00479Q96M42 142 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 FBXL15Q9H469 300 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 USP9XQ93008 2570 aaPredicted RBP11.35□□□□□ -0.59
NCLN-201ENST00000246117 KBTBD11-OT1A0A1B0GTJ5 212 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 GNG7O60262 68 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 MPDU1O75352 247 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 PRSS3P2Q8NHM4 247 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
NCLN-201ENST00000246117 IGKV1D-17A0A075B6S4 117 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 SERF1AO75920 110 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 HINT1P49773 126 aaPredicted RBP11.34□□□□□ -0.59
NCLN-201ENST00000246117 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 NBEAQ8NFP9 2946 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.593e-7■■■□□ 18.8
NCLN-201ENST00000246117 CCKARP32238 428 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 EFNB3Q15768 340 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 CCL21O00585 134 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 OR2J3O76001 311 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 C14orf144Q96I85 54 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
NCLN-201ENST00000246117 A0A087WWC5 75 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 ADMP35318 185 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 SSX8Q7RTT4 187 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 A0A1W2PNU3 283 aaPredicted RBP11.33□□□□□ -0.6
NCLN-201ENST00000246117 C15orf62A8K5M9 175 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 NDUFA2O43678 99 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 SS18L1O75177 396 aaPredicted RBP11.33□□□□□ -0.6
NCLN-201ENST00000246117 BRS3P32247 399 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
NCLN-201ENST00000246117 TIMM23BQ5SRD1 257 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 BMPR1BO00238 502 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 ECSCRQ19T08 205 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
NCLN-201ENST00000246117 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
NCLN-201ENST00000246117 SNAI2O43623 268 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 WT1P19544 449 aaPredicted RBP11.32□□□□□ -0.6
NCLN-201ENST00000246117 ZNF600Q6ZNG1 722 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 PRRX1P54821 245 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 AARDQ4LEZ3 155 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 HYPMO75409 117 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 SCGB2A1O75556 95 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 CEACAM1P13688 526 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 PRSS8Q16651 343 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 TMEM177Q53S58 311 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 C19orf35Q6ZS72 473 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 LINC01551Q86U37 167 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 MGST2Q99735 147 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 CBY3A6NI87 242 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 SPRNQ5BIV9 151 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 PNKDQ8N490 385 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 IGFBPL1Q8WX77 278 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 NEUROG1Q92886 237 aa11.32□□□□□ -0.6
NCLN-201ENST00000246117 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 CTAG1AP78358 180 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 COL8A2P25067 703 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 FCGR2BP31994 310 aaPredicted RBP11.31□□□□□ -0.6
NCLN-201ENST00000246117 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 MMP23AO75900 390 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 IGHV1-46P01743 117 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 TFPI2P48307 235 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
NCLN-201ENST00000246117 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
NCLN-201ENST00000246117 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 FOLR2P14207 255 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 NHLH1Q02575 133 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
NCLN-201ENST00000246117 MGAQ8IWI9 3026 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 ORM1P02763 201 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 PERPQ96FX8 193 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms