RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CHRNA7P36544 502 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 UBE2E1P51965 193 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 TMEM249Q2WGJ8 235 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 C10orf55Q5SWW7 151 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 RAB24Q969Q5 203 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 DPM3Q9P2X0 92 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 NOTCH2Q04721 2471 aa18.11■□□□□ 0.49
CDX1-201ENST00000231656 A0A1W2PPI3 338 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 HMGB3O15347 200 aaKnown RBP18.1■□□□□ 0.49
CDX1-201ENST00000231656 GCSAMLQ5JQS6 135 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 TEPPQ6URK8 271 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 CYB561D1Q8N8Q1 229 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 PXMP4Q9Y6I8 212 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 ABCA1O95477 2261 aa18.1■□□□□ 0.49
CDX1-201ENST00000231656 IGHV4-31P0DP07 118 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 GATA3P23771 443 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 ERHP84090 104 aaKnown RBP18.09■□□□□ 0.49
CDX1-201ENST00000231656 WT1-ASQ06250 92 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 AWAT1Q58HT5 328 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 TPTE2P1Q5T6R2 138 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 MIC13Q5XKP0 118 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 LHFPL4Q7Z7J7 247 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 C7orf69Q9H7B7 122 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 IFNA1P01562 189 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 DEFA4P12838 97 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 CNTFRP26992 372 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 CDC34P49427 236 aaPredicted RBP18.09■□□□□ 0.49
CDX1-201ENST00000231656 PSG5Q15238 335 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 KCNIP2Q9NS61 270 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 VAX2Q9UIW0 290 aa18.09■□□□□ 0.49
CDX1-201ENST00000231656 CENPVL3A0A0U1RRI6 287 aa18.08■□□□□ 0.48
CDX1-201ENST00000231656 CEACAM3P40198 252 aa18.08■□□□□ 0.48
CDX1-201ENST00000231656 PRSS8Q16651 343 aa18.08■□□□□ 0.48
CDX1-201ENST00000231656 TMPRSS5Q9H3S3 457 aa18.08■□□□□ 0.48
CDX1-201ENST00000231656 FLNAP21333 2647 aaKnown RBP18.08■□□□□ 0.48
CDX1-201ENST00000231656 TGFAP01135 160 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 LGALS4P56470 323 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 TEX15Q9BXT5 2789 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 MINOS1Q5TGZ0 78 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 RBMS3Q6XE24 437 aaKnown RBP18.07■□□□□ 0.48
CDX1-201ENST00000231656 TMEM144Q7Z5S9 345 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 MMD2Q8IY49 270 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 SSMEM1Q8WWF3 244 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 P2RX4Q99571 388 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 SIGLEC9Q9Y336 463 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 HILPDAQ9Y5L2 63 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 MINOS1-NBL1R4GNA1 71 aa18.07■□□□□ 0.48
CDX1-201ENST00000231656 C7orf77A4D0Y5 90 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 M0R036 132 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 RPL29P47914 159 aaKnown RBP18.06■□□□□ 0.48
CDX1-201ENST00000231656 CD69Q07108 199 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 RAB31Q13636 194 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 CIARTQ8N365 385 aaPredicted RBP18.06■□□□□ 0.48
CDX1-201ENST00000231656 C20orf24Q9BUV8 137 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 MYO9AB2RTY4 2548 aa18.06■□□□□ 0.48
CDX1-201ENST00000231656 PLXNB1O43157 2135 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 SNRNP70P08621 437 aaKnown RBP18.05■□□□□ 0.48
CDX1-201ENST00000231656 CEBPGP53567 150 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 GAMTQ14353 236 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 AKIRIN2Q53H80 203 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 FAM90A2PQ658T7 463 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 STPG3Q8N7X2 389 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 RNF5Q99942 180 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 TBL2Q9Y4P3 447 aaKnown RBP18.05■□□□□ 0.48
CDX1-201ENST00000231656 PUS1Q9Y606 427 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDX1-201ENST00000231656 NAV3Q8IVL0 2385 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 CSPG4Q6UVK1 2322 aa18.05■□□□□ 0.48
CDX1-201ENST00000231656 H3BQ15 152 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 TIMM23O14925 209 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 GPX4P36969 197 aaPredicted RBP18.04■□□□□ 0.48
CDX1-201ENST00000231656 AKR1C3P42330 323 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 B2MP61769 119 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PRR20EP86478 221 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PRR20CP86479 221 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PRR20DP86480 221 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PRR20BP86481 221 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PRR20AP86496 221 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 MLANAQ16655 118 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 C17orf50Q8WW18 174 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 RPS10P5Q9NQ39 176 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 SLC45A2Q9UMX9 530 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 IGKV1OR2-108A0A075B7D4 117 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 TRAV40A0A0B4J280 105 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 NPFFO15130 113 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 AVPP01185 164 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PAX6P26367 422 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 MAS1LP35410 378 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 SAA4P35542 130 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 RHEBQ15382 184 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 SSX2Q16385 188 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 CACNG8Q8WXS5 425 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 CFHR4Q92496 578 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 MANBALQ9NQG1 85 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 SMCO4Q9NRQ5 59 aa18.04■□□□□ 0.48
CDX1-201ENST00000231656 IGHV1-69DA0A0B4J2H0 117 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 IGLC7A0M8Q6 106 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 VENTXO95231 258 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 IGHV1-69P01742 117 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 LINC00869P0C866 280 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms