RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 WNK2Q9Y3S1 2297 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 A0A1W2PPV4 95 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 FCN1O00602 326 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 NBR2O15453 112 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 MMDQ15546 238 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 REG1AP05451 166 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 SNRNP70P08621 437 aaKnown RBP14.83□□□□□ -0.04
CTSA-201ENST00000191018 AREGP15514 252 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 LGALS4P56470 323 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 EBI3Q14213 229 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 FBLN7Q53RD9 439 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 SLC35E3Q7Z769 313 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 C17orf50Q8WW18 174 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 SRSF12Q8WXF0 261 aaKnown RBP14.83□□□□□ -0.04
CTSA-201ENST00000191018 SLC35E1Q96K37 410 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 MANBALQ9NQG1 85 aa14.83□□□□□ -0.04
CTSA-201ENST00000191018 IGHV4-61A0A0C4DH41 118 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 STAG3L2P0CL84 134 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 STAG3L3P0CL85 134 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 TAGLN2P37802 199 aaKnown RBP14.82□□□□□ -0.04
CTSA-201ENST00000191018 MFAP2P55001 183 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 ATP5J2P56134 94 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 GNB1P62873 340 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 TMEM88Q6PEY1 159 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 OR2T10Q8NGZ9 312 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 OR2T6Q8NHC8 308 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 AJUBAQ96IF1 538 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 SRSF8Q9BRL6 282 aaKnown RBP14.82□□□□□ -0.04
CTSA-201ENST00000191018 ABCA2Q9BZC7 2435 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 MED13LQ71F56 2210 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 EPG5Q9HCE0 2579 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 NDUFS6O75380 124 aaKnown RBP14.82□□□□□ -0.04
CTSA-201ENST00000191018 CD24P25063 80 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 OR10J1P30954 320 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 MEF2BQ02080 365 aaPredicted RBP14.82□□□□□ -0.04
CTSA-201ENST00000191018 PLGLAQ15195 96 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 AWAT1Q58HT5 328 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 FAM90A2PQ658T7 463 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 CLEC2AQ6UVW9 174 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 CBLN2Q8IUK8 224 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 Q8N6K4 173 aa14.82□□□□□ -0.04
CTSA-201ENST00000191018 CRYGCP07315 174 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 PSMB3P49720 205 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 CD81P60033 236 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 OR1P1Q8NH06 330 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 ABHD5Q8WTS1 349 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 MALSU1Q96EH3 234 aa14.81□□□□□ -0.04
CTSA-201ENST00000191018 PAX1P15863 534 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 SEPSECSQ9HD40 501 aaKnown RBP14.8□□□□□ -0.04
CTSA-201ENST00000191018 C7orf77A4D0Y5 90 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 RHOBP62745 196 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 PAX8Q06710 450 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 HES1Q14469 280 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 C5orf64Q2M2E5 130 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 THAP8Q8NA92 274 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 GATAD1Q8WUU5 269 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 ACY3Q96HD9 319 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 LPAR2Q9HBW0 351 aa14.8□□□□□ -0.04
CTSA-201ENST00000191018 MRPL36Q9P0J6 103 aaKnown RBP14.8□□□□□ -0.04
CTSA-201ENST00000191018 F11RQ9Y624 299 aaKnown RBP14.8□□□□□ -0.04
CTSA-201ENST00000191018 H3BQ15 152 aa14.79□□□□□ -0.04
CTSA-201ENST00000191018 TSPAN4O14817 238 aa14.79□□□□□ -0.04
CTSA-201ENST00000191018 COX6B1P14854 86 aa14.79□□□□□ -0.04
CTSA-201ENST00000191018 CEBPGP53567 150 aa14.79□□□□□ -0.04
CTSA-201ENST00000191018 RHEBQ15382 184 aa14.79□□□□□ -0.04
CTSA-201ENST00000191018 PUS1Q9Y606 427 aaKnown RBP eCLIP14.79□□□□□ -0.04
CTSA-201ENST00000191018 UTP20O75691 2785 aaKnown RBP14.78□□□□□ -0.04
CTSA-201ENST00000191018 IGKV1D-37A0A075B6S9 117 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 IGHV4-30-2A0A087WSY4 118 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 M0R036 132 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 CORTO00230 105 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 ARL14EPLP0DKL9 152 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 APELAP0DMC3 54 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 ETFRF1Q6IPR1 90 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 SPNS3Q6ZMD2 512 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 C19orf35Q6ZS72 473 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 CYP2G1PQ6ZSU1 146 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 NPIPB3Q92617 1050 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 C20orf24Q9BUV8 137 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 CXorf1O96002 111 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 GATA2P23769 480 aaPredicted RBP14.78□□□□□ -0.04
CTSA-201ENST00000191018 SAA4P35542 130 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 SPATA31B1PQ5VZV4 182 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 IQCF2Q8IXL9 164 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 RPS10P5Q9NQ39 176 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 DMRT1Q9Y5R6 373 aa14.78□□□□□ -0.04
CTSA-201ENST00000191018 TMEM250H0YL14 139 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 PAGE4O60829 102 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 MISP3Q96FF7 219 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 PERPQ96FX8 193 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 NIPSNAP3BQ9BS92 247 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 C19orf24Q9BVV8 132 aa14.77□□□□□ -0.05
CTSA-201ENST00000191018 CENPVL3A0A0U1RRI6 287 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 TCRBV4S1A1TA0A5B7 111 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 PSMB11A5LHX3 300 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 CNIH1O95406 144 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 IGHV3-48P01763 117 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 AKIRIN2Q53H80 203 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 FAM78BQ5VT40 261 aa14.76□□□□□ -0.05
CTSA-201ENST00000191018 RUSC1-AS1Q66K80 236 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms