RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Upk3aQ9JKX8 287 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Fzr1Q9R1K5 493 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm10073E9Q3T0 114 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lgals9O08573 353 aaKnown RBP12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Nanos3P60324 178 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Defa26Q3L180 93 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Foxb1Q64732 325 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 BtlaQ7TSA3 306 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 LgalslQ8VED9 172 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Necap2Q9D1J1 266 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Slc48a1Q9D8M3 146 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Sbf1Q6ZPE2 1867 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm5108J3QP01 101 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 P06334 169 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 HhexP43120 271 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 TigitP86176 249 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ino80cQ8BHA0 191 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Kbtbd11Q8BNW9 633 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cox6cQ9CPQ1 76 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 TncQ80YX1 2110 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gp2Q9D733 531 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Vmn1r46Q9EQ45 309 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Zfp950A0A0U1RQ46 609 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Prss12O08762 761 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ppt2O35448 302 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Rps4xP62702 263 aaKnown RBP12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Znf511Q6P0X2 227 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Klrc3Q9QXN7 221 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Col22a1E9Q7P1 1613 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Igkv5-43A0A0B4J1J2 115 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm21981D3Z6Q6 369 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Klf9O35739 244 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 St3gal2Q11204 350 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Slco4c1Q8BGD4 722 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Tspan13Q9D8C2 204 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Fam213bQ9DB60 201 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 VegfbP49766 207 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Slc25a26Q5U680 274 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Npy4rQ61041 375 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ndufaf3Q9JKL4 185 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ly6dP35459 127 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Nsun3Q8CCT7 348 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 A0A286YD13 301 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Taar3Q5QD16 343 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 C1rbQ8CFG9 706 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Abhd14aQ922Q6 247 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Mrm2Q9CPY0 246 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Socs6Q9JLY0 533 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Olfr1331K7N684 317 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Vmn1r128L7N2B4 307 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Olfr965Q7TRA7 312 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Olfr1350Q8VF34 308 aa12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Dnajb12Q9QYI4 376 aaKnown RBP12.33□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ctxnd1A0A1B0GST9 59 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Cox5bP19536 128 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Oas1bQ60856 376 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 BocQ6AZB0 1110 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Slc25a37Q920G8 338 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Abhd12Q99LR1 398 aaKnown RBP12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Exph5Q0VAV2 1960 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 P01670 111 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 P01671 111 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 P01672 111 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 CtdsplP58465 276 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Olfr90Q0VEL5 310 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Olfr332Q5NC45 344 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Megf11Q80T91 1091 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm2026A2ART4 498 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Tgfbr3lD3YZZ2 297 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm21874J3QNZ6 232 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Psmg4P0C7N9 123 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Prg2Q61878 223 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm14124A2AU83 715 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 EcscrQ3TZW0 214 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Mrpl33Q9CQP0 65 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Herpud1Q9JJK5 391 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm12117V9GXK0 151 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Pitx3O35160 302 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Apobec1P51908 229 aaKnown RBP12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Sssca1P56873 199 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ip6k3Q8BWD2 396 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gprin2D3Z1D7 455 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Nudt16l1Q8VHN8 211 aaKnown RBP12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 RetnQ99P87 114 aa12.32□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ighv6-6A0A075B5T3 119 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 BC025446A0A087WQT1 134 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 P01803 113 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 PlauP06869 433 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Lrrc10Q8K3W2 274 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Tbx21Q9JKD8 530 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Foxq1O70220 400 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Ca3P16015 260 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Plet1Q8VEN2 237 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Abca4O35600 2310 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Tmem95P0DJF3 176 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Mpc2Q9D023 127 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Gm15013V9GWY0 266 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Hmga1P17095 107 aaKnown RBP12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Arf6P62331 175 aa12.31□□□□□ -0.44
Col5a1-201ENSMUST00000028280 Wdr5bQ9D7H2 328 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 93.9 ms