RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Hsf1P38532 525 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Xaf1Q5NBU8 273 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ceacam9Q78T27 234 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1028Q7TR89 324 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr782Q7TRI2 314 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Lcn10Q810Z1 182 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr136Q8VG72 312 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ear10Q923L6 156 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cdc42ep3Q9CQC5 254 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Barx1Q9ER42 254 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Kcnk5Q9JK62 502 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr154Q9QY00 318 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 DeddQ9Z1L3 318 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm45783A0A1B0GT48 74 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Aqp7O54794 303 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 SrcP05480 541 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Lpar5Q149R9 372 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr786Q8VFH8 312 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 B3gnt9Q8VI16 399 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Thap8E9Q695 213 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Vmn1r128L7N2B4 307 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 P01798 113 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Pdcd6P12815 191 aaKnown RBP13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 H3f3aP84244 136 aaKnown RBP13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1442Q0VEV7 312 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Q3U595 105 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Zfp872Q3UVL3 465 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 AI987944Q7TPX5 406 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr804Q7TRH7 314 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Vgll4Q80V24 287 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Pgam5Q8BX10 288 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tmem56Q8CGF5 276 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Alkbh6Q8K2U2 238 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Abca4O35600 2310 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Eid2bE9Q2Y0 151 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tcstv1O70619 171 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Wfdc9Q3UW41 83 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Lrrc52Q5M8M9 314 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Slc25a35Q5SWT3 300 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 G6pc3Q6NSQ9 346 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Hide1Q75VT8 222 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr58Q7TRF6 309 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr112Q8C0S2 320 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 6030452D12RikQ8CD33 222 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Dppa2Q9CWH0 301 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Opn4Q9QXZ9 521 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Suclg1Q9WUM5 346 aaKnown RBP13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Prrc2cQ3TLH4 2846 aaKnown RBP13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20815J3KMI0 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20914J3QME2 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Hist1h1aP43275 213 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Rac1P63001 192 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ear1P97426 155 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Hhipl1Q14DK5 791 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Klf3Q60980 344 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm21292Q78EE2 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm5771Q792Y9 245 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Hist3h2bbQ8CGP0 126 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Uqcc1Q9CWU6 295 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Hist3h2baQ9D2U9 126 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Prg4Q9JM99 1054 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm29049A0A087WSM5 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr709-ps1A0A140T8J9 307 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm12887B1AVM1 119 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm21118J3QPK8 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr895L7N210 316 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Htr2bQ02152 479 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20909Q5FWB5 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20852Q5M8R5 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20917Q62457 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20809Q62458 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20865Q62460 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20738Q810R8 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20806Q9D9T3 227 aa13.85□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr418A0A140T8J6 310 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 4930435E12RikA6X8Z9 381 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tle4Q62441 773 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1260Q8VGN9 310 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Spsb1Q9D5L7 273 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Q9DAL9 119 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 PkdrejQ9Z0T6 2126 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm28372A0A087WNV0 220 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Trbv12-1A0A0B4J1H0 124 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ighv1-67A0A0G2JFN9 117 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Igkv12-89A0A0G2JGW8 112 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Vmn1r167G3UW71 315 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ercc1P07903 298 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Csn2P10598 231 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Defa-rs2P17534 91 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Mettl4Q3U034 471 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Fam173aQ501J2 229 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 SlaQ60898 281 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1204Q7TR10 309 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Q8BG31 207 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Prss45Q8K4I7 317 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1446Q8VFX4 308 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Rarres2Q9DD06 162 aa13.84□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm20918J3QN17 227 aa13.83□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tcf21O35437 179 aa13.83□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm9Q3UKW5 162 aa13.83□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms