RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	LINC00311	Q8N616	119 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	OR10K1	Q8NGX5	313 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	OR2T10	Q8NGZ9	312 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	OR56B4	Q8NH76	319 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	RGP1	Q92546	391 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	ARL11	Q969Q4	196 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	NICN1	Q9BSH3	213 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	CST11	Q9H112	138 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	FAM231B	A6NCW3	169 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	SMIM1	B2RUZ4	78 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	SDCBP	O00560	298 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	FCN1	O00602	326 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	GEMIN2	O14893	280 aa	Known RBP	4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	UBB	P0CG47	229 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	IGFBP3	P17936	291 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	CD24	P25063	80 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	MAS1L	P35410	378 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	WNT4	P56705	351 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	RPL8	P62917	257 aa	Known RBP	4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	ST3GAL4	Q11206	333 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	LTC4S	Q16873	150 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	XAF1	Q6GPH4	301 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	BAIAP2L2	Q6UXY1	529 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	SLC35E3	Q7Z769	313 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	LYG1	Q8N1E2	194 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	DRAM1	Q8N682	238 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	C5orf56	Q8N8D9	126 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	C15orf54	Q8N8G6	183 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF738	Q8NE65	137 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	RFESD	Q8TAC1	157 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	RAB3C	Q96E17	227 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523		Q9HAA7	133 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	KCNIP1	Q9NZI2	227 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	TRAPPC2L	Q9UL33	140 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	ERGIC3	Q9Y282	383 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	STAB2	Q8WWQ8	2551 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHV1-3	A0A0C4DH29	117 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	NCBP2L	A6PVI3	153 aa	Known RBP	4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	MOS	P00540	346 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	IGKV1D-33	P01593	117 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	IGKV1-33	P01594	117 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHG2	P01859	326 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	MT-ND4	P03905	459 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	OR5H8	P0DN80	308 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	FUT3	P21217	361 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	VHL	P40337	213 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF137P	P52743	207 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	EBI3	Q14213	229 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	LRRC36	Q1X8D7	754 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	KIAA1644	Q3SXP7	199 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	COX19	Q49B96	90 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	GLIPR1L1	Q6UWM5	242 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF680	Q8NEM1	530 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	UFD1	Q92890	307 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	LEAP2	Q969E1	77 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	PGLYRP3	Q96LB9	341 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	MND1	Q9BWT6	205 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	PLCXD1	Q9NUJ7	323 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	PLEKHJ1	Q9NW61	149 aa		4.82	□□□□□ -1.64
CASC19-238	ENST00000641523	TRDC	B7Z8K6	153 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	C15orf65	H3BRN8	121 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	PDCD6	O75340	191 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	PRSS1	P07477	247 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	CEL	P19835	753 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	FGF9	P31371	208 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	MYCNOS	P40205	109 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	RPS11	P62280	158 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	ATP6V1F	Q16864	119 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	TCTEX1D4	Q5JR98	221 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	GLT8D1	Q68CQ7	371 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	OR8G2P	Q6IF36	304 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	UNQ9370/PRO34162	Q6UXP9	181 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	MOB1B	Q7L9L4	216 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	PRSS48	Q7RTY5	328 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	GAPT	Q8N292	157 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF485	Q8NCK3	441 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	DERL3	Q96Q80	235 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	RASL11B	Q9BPW5	248 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	ABRACL	Q9P1F3	81 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF580	Q9UK33	172 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	JPT1	Q9UK76	154 aa		4.81	□□□□□ -1.64
CASC19-238	ENST00000641523	TRAV8-7	A0A075B6U6	113 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	C12orf77	C9JDV5	145 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	BMPR1B	O00238	502 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	MPDU1	O75352	247 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	OXT	P01178	125 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHV3-7	P01780	117 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	MAS1	P04201	325 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	RPL36A	P83881	106 aa	Known RBP	4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	TMEM187	Q14656	261 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	IDNK	Q5T6J7	187 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	SYT6	Q5T7P8	510 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF695	Q8IW36	515 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	STPG2	Q8N412	459 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	OR8U1	Q8NH10	309 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	GALM	Q96C23	342 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	PACRG	Q96M98	296 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	SELENOI	Q9C0D9	397 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms