RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 OPN1MWP04001 364 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OPN1MW2P0DN77 364 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OPN1MW3P0DN78 364 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR13C7P0DN81 318 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 HOXB4P17483 251 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 ATP5IP56385 69 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 ARL16Q0P5N6 197 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 POU2AF1Q16633 256 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 VMA21Q3ZAQ7 101 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 TMEM177Q53S58 311 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 FAM90A2PQ658T7 463 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR8G2PQ6IF36 304 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 C1orf122Q6ZSJ8 110 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 IQCF2Q8IXL9 164 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 CYB561D1Q8N8Q1 229 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR11H6Q8NGC7 330 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR10P1Q8NGE3 313 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR4C12Q96R67 309 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 SSX3Q99909 188 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 TXNDC17Q9BRA2 123 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 MAP1LC3BQ9GZQ8 125 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 SIRPDQ9H106 197 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 DPM3Q9P2X0 92 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 TENM4Q6N022 2769 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 CR1P17927 2039 aa7.15□□□□□ -1.27
PHGDH-219ENST00000641513 DOPEY2Q9Y3R5 2298 aa7.15□□□□□ -1.27
PHGDH-219ENST00000641513 ABCA2Q9BZC7 2435 aa7.15□□□□□ -1.27
PHGDH-219ENST00000641513 UTP20O75691 2785 aaKnown RBP7.14□□□□□ -1.27
PHGDH-219ENST00000641513 SMCO3A2RU48 225 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 SEC14L6B5MCN3 397 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 FNDC10F2Z333 226 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 TIMM23O14925 209 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 SLC25A17O43808 307 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 KBTBD11O94819 623 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 IFNA10P01566 189 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 S100A6P06703 90 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 MYOD1P15172 320 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 PAX1P15863 534 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 SLC25A16P16260 332 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 MEOX2P50222 304 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 HSPE1P61604 102 aaKnown RBP7.14□□□□□ -1.27
PHGDH-219ENST00000641513 DLK1P80370 383 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 SSX2Q16385 188 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 HIST2H2BCQ6DN03 193 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 HCP5Q6MZN7 132 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 CYP2G1PQ6ZSU1 146 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 LHFPL4Q7Z7J7 247 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 VSTM2AQ8TAG5 236 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 RSG1Q9BU20 258 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 COMMD5Q9GZQ3 224 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 FKBP11Q9NYL4 201 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 BET1LQ9NYM9 111 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 TCF19Q9Y242 345 aa7.14□□□□□ -1.27
PHGDH-219ENST00000641513 FOXA2Q9Y261 457 aaPredicted RBP7.14□□□□□ -1.27
PHGDH-219ENST00000641513 PUS1Q9Y606 427 aaKnown RBP eCLIP7.14□□□□□ -1.27
PHGDH-219ENST00000641513 TNCP24821 2201 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 UBE2L5PA0A1B0GUS4 154 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 A0A1W2PPI3 338 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 ODF3BA8MYP8 253 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 LY6LH3BQJ8 138 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 AP4M1O00189 453 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 VENTXO95231 258 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 USF1P22415 310 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-219ENST00000641513 LGALS7P47929 136 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 PSMB3P49720 205 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-219ENST00000641513 PAX2Q02962 417 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 HES1Q14469 280 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 HNF4GQ14541 408 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 PLGLAQ15195 96 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 HAGHQ16775 308 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 CCDC144NLQ6NUI1 221 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 OR4A5Q8NH83 315 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 TBX15Q96SF7 602 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 ACTR3CQ9C0K3 210 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-219ENST00000641513 PLEKHA3Q9HB20 300 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 TMEM14BQ9NUH8 114 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 BEX4Q9NWD9 120 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-219ENST00000641513 WDR83OSQ9Y284 106 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 PLXNB1O43157 2135 aa7.13□□□□□ -1.27
PHGDH-219ENST00000641513 ANKRD17O75179 2603 aaKnown RBP7.13□□□□□ -1.27
PHGDH-219ENST00000641513 IGHV3OR16-10A0A075B7F0 116 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 TEX50A0A1B0GTY4 177 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 CLDN34H7C241 214 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 ACTL6BO94805 426 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 CD24P25063 80 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 CNTFRP26992 372 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 UBE2E1P51965 193 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 RAB11AP62491 216 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 GNB1P62873 340 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 RPL8P62917 257 aaKnown RBP7.12□□□□□ -1.27
PHGDH-219ENST00000641513 ELOBQ15370 118 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms