RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PFN2P35080 140 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 OTOSQ8NHW6 89 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 S1PR3Q99500 378 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 VSIRQ9H7M9 311 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 LSM4Q9Y4Z0 139 aaKnown RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 NCR2O95944 276 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 ELOCQ15369 112 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 RPL7L1Q6DKI1 246 aaKnown RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 HAPLN4Q86UW8 402 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 BMFQ96LC9 184 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TMED7-TICAM2A0A0A6YYA0 188 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 C3orf85A0A1B0GTC6 90 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 RRHO14718 337 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 SCGB1C2P0DMR2 95 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 PRSS3P35030 304 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 PRDX1Q06830 199 aaKnown RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF672Q499Z4 452 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TEN1Q86WV5 123 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 ZIC4Q8N9L1 334 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TEX45Q8NA69 505 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 AGMATQ9BSE5 352 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 WRAP73Q9P2S5 460 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 CKLFQ9UBR5 152 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 CHCHD2Q9Y6H1 151 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 CD163L1Q9NR16 1453 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 A0A0U1RQV1 116 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 LOC107984640A0A0U1RRK4 108 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 C9JQL5 133 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 SBK3P0C264 359 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 FAM53BQ14153 422 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 C3orf22Q8N5N4 141 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM133Q9H2Q1 129 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF576Q9H609 170 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 SLC39A9Q9NUM3 307 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 NPC2P61916 151 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 UNC119Q13432 240 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 DNM1P46Q6ZS02 220 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM179BQ7Z7N9 219 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 MDFICQ9P1T7 246 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 RARRES3Q9UL19 164 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 SLIT1O75093 1534 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV14DV4A0A0A6YYC5 116 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 A6NIN4 97 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 MBD3L2Q8NHZ7 208 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 MALRD1Q5VYJ5 2156 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 WDR90Q96KV7 1748 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 MSGN1A6NI15 193 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 FAM90A1Q86YD7 464 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 GAPTQ8N292 157 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM256Q8N2U0 113 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 OR11H6Q8NGC7 330 aa3.61□□□□□ -1.83
SCN3A-209ENST00000639244 M0R129 80 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LIFP15018 202 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 NCBP2P52298 156 aaKnown RBP eCLIP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF324BQ6AW86 544 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 CYP2G1PQ6ZSU1 146 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 HSD11B1LQ7Z5J1 315 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 DLX4Q92988 240 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF286AQ9HBT8 521 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 TAAR3PQ9P1P4 343 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 A0A0G2JMZ2 1700 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LRRC37A2A6NM11 1700 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LRRC37AA6NMS7 1700 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 COL11A1P12107 1806 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 A8MT66 165 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 IL15RAQ13261 267 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 RRN3P1Q2M238 152 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 PYGO2Q9BRQ0 406 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV1-2A0A0B4J238 106 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 FAM236AA0A1B0GUQ0 79 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 FAM236BA0A1B0GV22 79 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 MYBPHLA2RUH7 354 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 FGF1P05230 155 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 CD226Q15762 336 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 APCDD1LQ8NCL9 501 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV27A0A087WT01 109 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LYRM9A8MSI8 78 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 J3QLW9 94 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 BUB3O43684 328 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 HLA-DQA1P01909 254 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 CFHR1Q03591 330 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 SLC38A11Q08AI6 406 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ASPHD1Q5U4P2 390 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF584Q8IVC4 421 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LRRC29Q8WV35 223 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 RTL8AQ9BWD3 113 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 U3KQE9 123 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 NBASA2RRP1 2371 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 MDFIC2A0A1B0GVS7 189 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LMO7DNF2Z398 122 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 K7N7A8 449 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF688P0C7X2 276 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 C6orf201Q7Z4U5 140 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ATOH7Q8N100 152 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 CRYGNQ8WXF5 182 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 WDYHV1Q96HA8 205 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms