RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 IFNA7P01567 189 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 HOXA5P20719 270 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 VDAC2P45880 294 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PSMB2P49721 201 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 THBS3P49746 956 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 RPS11P62280 158 aaKnown RBP eCLIP3.74□□□□□ -1.81
SDCBP-213ENST00000630925 OGFOD2Q6N063 350 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 TEX43Q6ZNM6 134 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PACRGLQ8N7B6 248 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 ZDHHC22Q8N966 263 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 OR52P1PQ8NH57 321 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 OR9G1Q8NH87 305 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 FLVCR1-AS1Q8TAF5 88 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 NEURL3Q96EH8 262 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 ZC2HC1AQ96GY0 325 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 NMNAT3Q96T66 252 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 HIST1H4GQ99525 98 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PAXXQ9BUH6 204 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 C1QTNF6Q9BXI9 259 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 SOX21Q9Y651 276 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-213ENST00000630925 NBEAQ8NFP9 2946 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 CDK5RAP2Q96SN8 1893 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV2-26A0A0B4J1V2 119 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 GGT3PA6NGU5 568 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 FAM220BPB1ANY3 271 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 GGTLC3B5MD39 225 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 CCDC179H3BU77 68 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PIRO00625 290 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 MGST3O14880 152 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 AGPAT2O15120 278 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 SNAPC5O75971 98 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 TRAPPC2P0DI81 140 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 TRAPPC2BP0DI82 140 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 IGLL1P15814 213 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PPIBP23284 216 aaKnown RBP3.74□□□□□ -1.81
SDCBP-213ENST00000630925 TAS2R46P59540 309 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 ABCA11PQ4W5N1 156 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 Q5BKY6 102 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 DNM1P46Q6ZS02 220 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 PRNTQ86SH4 94 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 SLC25A21Q9BQT8 299 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-213ENST00000630925 RTL8AQ9BWD3 113 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 LINC00527Q9UJ94 153 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 TENM4Q6N022 2769 aa3.74□□□□□ -1.81
SDCBP-213ENST00000630925 SPTBN2O15020 2390 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 LOC400499M0QZD8 3231 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 IGKV1-8A0A0C4DH67 115 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 PNMA8CA0A1B0GUJ8 204 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 INAFM1C9JVW0 142 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF670-ZNF695F2Z2N8 137 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 K7EQG2 157 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF138P52744 262 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 RBM11P57052 281 aaKnown RBP3.73□□□□□ -1.81
SDCBP-213ENST00000630925 BTG2P78543 158 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 CST6Q15828 149 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 FAM74A1Q5RGS3 127 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 C1orf100Q5SVJ3 147 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 Q6Q795 121 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 FOXI2Q6ZQN5 318 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 PRR15Q8IV56 129 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 RFLNBQ8N5W9 214 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 YIPF7Q8N8F6 280 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 PPTC7Q8NI37 304 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 LINC00052Q96N35 136 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 ERMAPQ96PL5 475 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-213ENST00000630925 TM2D3Q9BRN9 247 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 DEFB127Q9H1M4 99 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 CXorf21Q9HAI6 301 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 PCTPQ9UKL6 214 aa3.73□□□□□ -1.81
SDCBP-213ENST00000630925 NUP210Q8TEM1 1887 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-213ENST00000630925 NCKAP5O14513 1909 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 ITPR1Q14643 2758 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TRAV8-1A0A0A6YYK1 113 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV3-38A0A0C4DH36 116 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 A0A0G2JMM0 328 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 A0A1W2PPB8 328 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 KIR3DP1A8MWS1 328 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TMEM250H0YL14 139 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 GABARAPH6UMI1 98 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 K7EQD1 137 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 K7N7A8 449 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 MRPS14O60783 128 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 SMIM10L2AP0DMW4 78 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 SMIM10L2BP0DMW5 78 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 OR12D1P0DN82 309 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 AQP1P29972 269 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TGFBR1P36897 503 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 MP68P56378 58 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 FKBP1AP62942 108 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 HERVK_113P63121 156 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TGIF1Q15583 401 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 FBXL19-AS1Q494R0 122 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 LINC00173Q6ZV60 143 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 PIP4P1Q86T03 277 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms