RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L2Q8NHZ7 208 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 SPG11Q96JI7 2443 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 NDFIP1Q9BT67 221 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 MALRD1Q5VYJ5 2156 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 B9A039 149 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 CCKARP32238 428 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 ZNF137PP52743 207 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 NPIPB11E5RHQ5 1161 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 HEPN1Q6WQI6 88 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 ELOVL1Q9BW60 279 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 SSBP3Q9BWW4 388 aaPredicted RBP10.97□□□□□ -0.65
SIRPA-204ENST00000622179 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
SIRPA-204ENST00000622179 C1QTNF9P0C862 333 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 CBLN1P23435 193 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 SNRNP40Q96DI7 357 aaKnown RBP10.97□□□□□ -0.65
SIRPA-204ENST00000622179 CLEC7AQ9BXN2 247 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 SSX7Q7RTT5 188 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 SLX1AQ9BQ83 275 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
SIRPA-204ENST00000622179 A0A0C4DFX4 3053 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 UPK2O00526 184 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 RBFOX2O43251 390 aaKnown RBP eCLIP10.96□□□□□ -0.65
SIRPA-204ENST00000622179 GFRA3O60609 400 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 VENTXO95231 258 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 PAX6P26367 422 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 UCNP55089 124 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 Q6ZS92 163 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.96□□□□□ -0.65
SIRPA-204ENST00000622179 HTR1DP28221 377 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 SPACA3Q8IXA5 215 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 ZNRD1Q9P1U0 126 aa10.96□□□□□ -0.65
SIRPA-204ENST00000622179 TNFSF13O75888 250 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 LGALS7P47929 136 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 ECSCRQ19T08 205 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 TMEM30BQ3MIR4 351 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 PRNTQ86SH4 94 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 VN1R17PQ8TDU5 208 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.66
SIRPA-204ENST00000622179 S4R3C0 116 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 WISP2O76076 250 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.66
SIRPA-204ENST00000622179 RPUSD1Q9UJJ7 312 aaKnown RBP10.96□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H1EP10412 219 aaKnown RBP10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 MEF2CQ06413 473 aaPredicted RBP10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
SIRPA-204ENST00000622179 Q6ZSR3 168 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 PAM16Q9Y3D7 125 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 PRUNE2Q8WUY3 3088 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 TRAV1-1A0A0B4J248 108 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 A0A0G2JNJ9 132 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 APCSP02743 223 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 DCAF16Q9NXF7 216 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 Q9UFV3 132 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 RNASE6Q93091 150 aaKnown RBP10.95□□□□□ -0.66
SIRPA-204ENST00000622179 CEP192Q8TEP8 1941 aa10.95□□□□□ -0.66
SIRPA-204ENST00000622179 HOXA5P20719 270 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 Q8NFD4 153 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 CDH23Q9H251 3354 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
SIRPA-204ENST00000622179 EFNB3Q15768 340 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 SPRY4Q9C004 299 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 LMO1P25800 156 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 BRS3P32247 399 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 DUX4L9Q6RFH8 374 aaPredicted RBP10.94□□□□□ -0.66
SIRPA-204ENST00000622179 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 DERL1Q9BUN8 251 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 GGTLC1Q9BX51 225 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 C15orf62A8K5M9 175 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 CD24P25063 80 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 KRTAP27-1Q3LI81 207 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
SIRPA-204ENST00000622179 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
SIRPA-204ENST00000622179 A0A1B0GW64 132 aa10.93□□□□□ -0.66
SIRPA-204ENST00000622179 M0R2Z0 102 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms