RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 WISP2O76076 250 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 COL8A2P25067 703 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 CEACAM8P31997 349 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 LRRC75BQ2VPJ9 315 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 NCMAPQ5T1S8 102 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 LYPD2Q6UXB3 125 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 HEPN1Q6WQI6 88 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ASCL4Q6XD76 172 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF525Q8N782 197 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 TXN2Q99757 166 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 PSMG3Q9BT73 122 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 MKI67P46013 3256 aaKnown RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 MYO9AB2RTY4 2548 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 IL6RP08887 468 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 HIST1H1BP16401 226 aaKnown RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 COMPP49747 757 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 TPPP2P59282 170 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 DEFA6Q01524 100 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 C5orf17Q8NAS9 161 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ANAPC16Q96DE5 110 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 C12orf57Q99622 126 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 FUT9Q9Y231 359 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 AUP1Q9Y679 476 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 F5H697 171 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 HAX1O00165 279 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 UPK2O00526 184 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 TIMM23O14925 209 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 IER3P46695 156 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 FAM3BP58499 235 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 RNASEKQ6P5S7 137 aaKnown RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 NUP37Q8NFH4 326 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 OR2D3Q8NGH3 330 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 GATAD1Q8WUU5 269 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 NOL4LQ96MY1 436 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 LOC102723971A0A1B0GUV8 181 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 WDR86Q86TI4 376 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 LRTM2Q8N967 370 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 OR4D5Q8NGN0 318 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 OR51M1Q9H341 326 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 UFC1Q9Y3C8 167 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 IGKV1-6A0A0C4DH72 117 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 LINC00473A8K010 186 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 ZNF253O75346 499 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 FAM53AQ6NSI3 398 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 FA2HQ7L5A8 372 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 FAM169BQ8N8A8 192 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 OR10W1Q8NGF6 305 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 SRSF12Q8WXF0 261 aaKnown RBP6.02□□□□□ -1.45
CSDE1-218ENST00000610726 GAFA1Q96PS6 74 aa6.02□□□□□ -1.45
CSDE1-218ENST00000610726 C15orf61A6NNL5 157 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 SNURFLB1AK76 121 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 BMPR1BO00238 502 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 ZNF207O43670 478 aaKnown RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 IGKV1-5P01602 117 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 CRISP2P16562 243 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 ANOS1P23352 680 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 MFAP2P55001 183 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 KLRD1Q13241 179 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 PARLQ9H300 379 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 FOXA2Q9Y261 457 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 RBFOX2O43251 390 aaKnown RBP eCLIP6.01□□□□□ -1.453e-6■■■■□ 22.3
CSDE1-218ENST00000610726 IGHV1-8P0DP01 117 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 GCHFRP30047 84 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 SRSF7Q16629 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 PRSS3P2Q8NHM4 247 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 METTL26Q96S19 204 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 WNT10AQ9GZT5 417 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 ZNRD1Q9P1U0 126 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 PRRC2CQ9Y520 2896 aaKnown RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 TRGV3P03979 118 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 HIST1H1EP10412 219 aaKnown RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 EFNA4P52798 201 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 PMS2P11Q13670 270 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 CYP2G1PQ6ZSU1 146 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 DYNLRB2Q8TF09 96 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 WFDC1Q9HC57 220 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 FBXL7Q9UJT9 491 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 HTTP42858 3142 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 IGHV2-26A0A0B4J1V2 119 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 TRAV3A0A0B4J244 114 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 IGHV3-66A0A0C4DH42 116 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 NBR2O15453 112 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 CGAP01215 116 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 AMTP48728 403 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 ATP5IP56385 69 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 DUX4L9Q6RFH8 374 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-218ENST00000610726 DMRTA2Q96SC8 542 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 LINC00527Q9UJ94 153 aa6.01□□□□□ -1.45
CSDE1-218ENST00000610726 PTPRSQ13332 1948 aa6□□□□□ -1.45
CSDE1-218ENST00000610726 TRAV40A0A0B4J280 105 aa6□□□□□ -1.45
CSDE1-218ENST00000610726 MYOD1P15172 320 aa6□□□□□ -1.45
CSDE1-218ENST00000610726 CFPP27918 469 aa6□□□□□ -1.45
CSDE1-218ENST00000610726 ATP5G2Q06055 141 aa6□□□□□ -1.45
CSDE1-218ENST00000610726 NMSQ5H8A3 153 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms