RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 STARD9Q9P2P6 4700 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 IGHV3OR16-8A0A075B7F1 116 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 SMIM31A0A1B0GVY4 71 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 C15orf62A8K5M9 175 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 ZNF207O43670 478 aaKnown RBP5.66□□□□□ -1.5
CUX1-219ENST00000606749 CTSGP08311 255 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 LAMTOR1Q6IAA8 161 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 TBC1D26Q86UD7 250 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 WFDC3Q8IUB2 231 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 OR1P1Q8NH06 330 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 ZNF414Q96IQ9 312 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 SEC22AQ96IW7 307 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 CMTM3Q96MX0 182 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 TSC22D3Q99576 134 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 C20orf24Q9BUV8 137 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 COMMD3Q9UBI1 195 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 UBQLN2Q9UHD9 624 aa5.66□□□□□ -1.5
CUX1-219ENST00000606749 DYNC2H1Q8NCM8 4307 aaKnown RBP5.66□□□□□ -1.5
CUX1-219ENST00000606749 RYR2Q92736 4967 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 C15orf61A6NNL5 157 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 I3L2K1 104 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 SPRY2O43597 315 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 TNFAIP8O95379 198 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 IGKV1-39P01597 117 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 APOA1P02647 267 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 IGKV1D-39P04432 117 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 S100GP29377 79 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 APOC4P55056 127 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 UCP3P55916 312 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 NCS1P62166 190 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 Q56UQ5 140 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 DMRTA1Q5VZB9 504 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 Q6ZWC4 215 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 H2BFWTQ7Z2G1 175 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 UBAC2Q8NBM4 344 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 OR4A16Q8NH70 328 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 FUNDC2Q9BWH2 189 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 SCPEP1Q9HB40 452 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 VCX3AQ9NNX9 186 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 SMPXQ9UHP9 88 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 TP53TG1Q9Y2A0 90 aa5.65□□□□□ -1.5
CUX1-219ENST00000606749 SACSQ9NZJ4 4579 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 KIR2DL5BA0A0G2JN68 375 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 KIR2DL5BA0A0G2JPC4 375 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 A0A0J9YWU9 116 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 UBE2CO00762 179 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 CHEK1O14757 476 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 NUPL2O15504 423 aaKnown RBP5.64□□□□□ -1.51
CUX1-219ENST00000606749 HPGDSO60760 199 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 IGHV3-48P01763 117 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 CTSDP07339 412 aaPredicted RBP5.64□□□□□ -1.51
CUX1-219ENST00000606749 ELK1P19419 428 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 FCGR2BP31994 310 aaPredicted RBP5.64□□□□□ -1.51
CUX1-219ENST00000606749 BMI1P35226 326 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 RCVRNP35243 200 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 RORCP51449 518 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 MFAP4P55083 255 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 HSPE1P61604 102 aaKnown RBP5.64□□□□□ -1.51
CUX1-219ENST00000606749 VBP1P61758 197 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 EWSR1Q01844 656 aaKnown RBP eCLIP5.64□□□□□ -1.51
CUX1-219ENST00000606749 RELQ04864 619 aaPredicted RBP5.64□□□□□ -1.51
CUX1-219ENST00000606749 TNFRSF9Q07011 255 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 ODF3L2Q3SX64 289 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 LYG2Q86SG7 212 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 SNX29P2Q8IUI4 249 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 KIR2DL5AQ8N109 375 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 STPG3Q8N7X2 389 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 TMEM116Q8NCL8 245 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 KIR2DL5BQ8NHK3 375 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 MISP3Q96FF7 219 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 OR10C1Q96KK4 312 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 RNF2Q99496 336 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 TXN2Q99757 166 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 RHPN1-AS1Q9BWJ2 59 aa5.64□□□□□ -1.51
CUX1-219ENST00000606749 TRAV14DV4A0A0A6YYC5 116 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 OR4C46A6NHA9 309 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 M0QYG6 137 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 YIF1AO95070 293 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 MT-CO2P00403 227 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 RPL35AP18077 110 aaKnown RBP5.63□□□□□ -1.51
CUX1-219ENST00000606749 CMC4P56277 68 aaPredicted RBP5.63□□□□□ -1.51
CUX1-219ENST00000606749 RND3P61587 244 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 ERHP84090 104 aaKnown RBP5.63□□□□□ -1.51
CUX1-219ENST00000606749 PRCDQ00LT1 54 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 IZUMO4Q1ZYL8 232 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 DEFB135Q30KP9 77 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 FAM90A2PQ658T7 463 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 APRG1Q8IVJ8 170 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 ZNF114Q8NC26 417 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 MRGPRFQ96AM1 343 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 RNF183Q96D59 192 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 GALNT14Q96FL9 552 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 NXF2Q9GZY0 626 aaKnown RBP5.63□□□□□ -1.51
CUX1-219ENST00000606749 MAP6D1Q9H9H5 199 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 KLK11Q9UBX7 282 aa5.63□□□□□ -1.51
CUX1-219ENST00000606749 IGHV3-49A0A0A0MS15 119 aa5.62□□□□□ -1.51
CUX1-219ENST00000606749 A0A0B4J293 547 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms