RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ZNF709Q8N972 641 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 MALSU1Q96EH3 234 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 AJUBAQ96IF1 538 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 RPL27AP46776 148 aaKnown RBP15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 CCL20P78556 96 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 BSXQ3C1V8 233 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 C2orf83Q53S99 150 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 MAPK1IP1LQ8NDC0 245 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 GGACTQ9BVM4 153 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 WDR83OSQ9Y284 106 aa15.34■□□□□ 0.05
TUBB4B-202ENST00000604929 NAV2Q8IVL1 2488 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 NCBP2LA6PVI3 153 aaKnown RBP15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 NBR2O15453 112 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 SCAF4O95104 1147 aaKnown RBP15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 COMPP49747 757 aaPredicted RBP15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 DLK1P80370 383 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 FAM120AOSQ5T036 256 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 RUSC1-AS1Q66K80 236 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 OR2T10Q8NGZ9 312 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 NPVFQ9HCQ7 196 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 TREM1Q9NP99 234 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 TBL2Q9Y4P3 447 aaKnown RBP15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 APCP25054 2843 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 NPFFO15130 113 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 MSMBP08118 114 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 AREGP15514 252 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 RAB2AP61019 212 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 C19orf35Q6ZS72 473 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 CENPVQ7Z7K6 275 aaPredicted RBP15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 C1orf159Q96HA4 380 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 KIAA1456Q9P272 454 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 TIMM9Q9Y5J7 89 aa15.33■□□□□ 0.04
TUBB4B-202ENST00000604929 NUDT19A8MXV4 375 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 OOSP1A8MZH6 123 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 CNIH1O95406 144 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 SSBP2P81877 361 aaPredicted RBP15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 FFAR4Q5NUL3 377 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 BRD3OSQ6XYD6 125 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 P2RX4Q99571 388 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 C7orf69Q9H7B7 122 aa15.32■□□□□ 0.04
TUBB4B-202ENST00000604929 IGHV3-48P01763 117 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 SPSB3Q6PJ21 355 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 SSX7Q7RTT5 188 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 MGST2Q99735 147 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 ABCA1O95477 2261 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 IGLC7A0M8Q6 106 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 C17orf112F2Z3M2 114 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 INS-IGF2F8WCM5 200 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 SLC25A16P16260 332 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 ZNF726P1Q15940 193 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 TMEM41BQ5BJD5 291 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 UQCC3Q6UW78 93 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 LCN15Q6UWW0 184 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 RPP25LQ8N5L8 163 aaKnown RBP15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 NPBQ8NG41 125 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 HIF1ANQ9NWT6 349 aa15.31■□□□□ 0.04
TUBB4B-202ENST00000604929 TRAV40A0A0B4J280 105 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 B4DSR2 109 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 KRBOX1C9JBD0 128 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 HMGB3O15347 200 aaKnown RBP15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 DEFA4P12838 97 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 ZP3P21754 424 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 MAS1LP35410 378 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 SSMEM1Q8WWF3 244 aa15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 SRSF12Q8WXF0 261 aaKnown RBP15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 EIF5A2Q9GZV4 153 aaKnown RBP15.3■□□□□ 0.04
TUBB4B-202ENST00000604929 TMEM11P17152 192 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 SUB1P53999 127 aaKnown RBP eCLIP15.29■□□□□ 0.043e-16■□□□□ 11.3
TUBB4B-202ENST00000604929 FGF8P55075 233 aaPredicted RBP15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 ATP5IP56385 69 aaPredicted RBP15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 GAMTQ14353 236 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 DEFB113Q30KQ7 82 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 GCSAMLQ5JQS6 135 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 TEPPQ6URK8 271 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 DPPA3Q6W0C5 159 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 OR2T6Q8NHC8 308 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 FAM103A1Q9BTL3 118 aaKnown RBP15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 C9JQL5 133 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 NDUFA3O95167 84 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 IGHV4-38-2P0DP08 117 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 OR10G4Q8NGN3 311 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 OR10G9Q8NGN4 311 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 OR10G7Q8NGN6 311 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 PSMG3-AS1Q96PY0 264 aa15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 LSM4Q9Y4Z0 139 aaKnown RBP15.29■□□□□ 0.04
TUBB4B-202ENST00000604929 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 TEX22C9J3V5 150 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 FAM106CPP0CH98 169 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 CD69Q07108 199 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 GUK1Q16774 197 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 C5orf64Q2M2E5 130 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 MIC13Q5XKP0 118 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 RARRES2Q99969 163 aa15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 SOX21Q9Y651 276 aaPredicted RBP15.28■□□□□ 0.04
TUBB4B-202ENST00000604929 IGHV1-69DA0A0B4J2H0 117 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 RNF223E7ERA6 249 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 MPDU1O75352 247 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 IGHV1-69P01742 117 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms