RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 UBE2CO00762 179 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 HLA-DMAP28067 261 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 S100GP29377 79 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
SCAF1-204ENST00000601038 UBAC2Q8NBM4 344 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 OR1P1Q8NH06 330 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 GPX8Q8TED1 209 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
SCAF1-204ENST00000601038 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 DBX1A6NMT0 343 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 SPRY2O43597 315 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 CTSGP08311 255 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 BMI1P35226 326 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 TSPAN5P62079 268 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 ODF3L2Q3SX64 289 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 PHLDA2Q53GA4 152 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 Q56UQ5 140 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 SLC25A46Q96AG3 418 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 VCX3AQ9NNX9 186 aa12.61□□□□□ -0.39
SCAF1-204ENST00000601038 IGHV3OR16-8A0A075B7F1 116 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 A0A087WXM4 84 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 SMIM31A0A1B0GVY4 71 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 OR4C46A6NHA9 309 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 C15orf61A6NNL5 157 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 EIF4EP06730 217 aaKnown RBP12.6□□□□□ -0.39
SCAF1-204ENST00000601038 TNFRSF9Q07011 255 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 SEC22AQ96IW7 307 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 CMTM3Q96MX0 182 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 SMPXQ9UHP9 88 aa12.6□□□□□ -0.39
SCAF1-204ENST00000601038 DNAH1Q9P2D7 4330 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 A0A0J9YWU9 116 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 NUPL2O15504 423 aaKnown RBP12.59□□□□□ -0.39
SCAF1-204ENST00000601038 ZNF207O43670 478 aaKnown RBP12.59□□□□□ -0.39
SCAF1-204ENST00000601038 APOA1P02647 267 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-204ENST00000601038 UCP3P55916 312 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 RELQ04864 619 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-204ENST00000601038 DEFB135Q30KP9 77 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 H2BFWTQ7Z2G1 175 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 TBC1D26Q86UD7 250 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 TXN2Q99757 166 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 SCPEP1Q9HB40 452 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 COMMD3Q9UBI1 195 aa12.59□□□□□ -0.39
SCAF1-204ENST00000601038 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 I3L2K1 104 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
SCAF1-204ENST00000601038 MFAP4P55083 255 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 ZNF114Q8NC26 417 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 RNF183Q96D59 192 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 GALNT14Q96FL9 552 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 ZNF414Q96IQ9 312 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 OR10C1Q96KK4 312 aa12.58□□□□□ -0.4
SCAF1-204ENST00000601038 EPPK1P58107 5090 aaKnown RBP12.57□□□□□ -0.4
SCAF1-204ENST00000601038 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 CHEK1O14757 476 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 IGKV1-39P01597 117 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 IGKV1D-39P04432 117 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 ATF4P18848 351 aaPredicted RBP12.57□□□□□ -0.4
SCAF1-204ENST00000601038 PRCDQ00LT1 54 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 TMEM116Q8NCL8 245 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 LINC00476Q8WZB0 136 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 RNF2Q99496 336 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
SCAF1-204ENST00000601038 IGHV7-4-1A0A0J9YVY3 117 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 YIF1AO95070 293 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 TNFAIP8O95379 198 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
SCAF1-204ENST00000601038 RCVRNP35243 200 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 CMC4P56277 68 aaPredicted RBP12.56□□□□□ -0.4
SCAF1-204ENST00000601038 HSPE1P61604 102 aaKnown RBP12.56□□□□□ -0.4
SCAF1-204ENST00000601038 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCAF1-204ENST00000601038 PMS2P11Q13670 270 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 SNX29P2Q8IUI4 249 aa12.56□□□□□ -0.4
SCAF1-204ENST00000601038 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
SCAF1-204ENST00000601038 HYDINQ4G0P3 5121 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 TRAV14DV4A0A0A6YYC5 116 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 MT-CO2P00403 227 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 NCS1P62166 190 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 ERHP84090 104 aaKnown RBP12.55□□□□□ -0.4
SCAF1-204ENST00000601038 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-204ENST00000601038 MRGPRFQ96AM1 343 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 FUNDC2Q9BWH2 189 aa12.55□□□□□ -0.4
SCAF1-204ENST00000601038 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-204ENST00000601038 ELK1P19419 428 aa12.54□□□□□ -0.4
SCAF1-204ENST00000601038 APRG1Q8IVJ8 170 aa12.54□□□□□ -0.4
SCAF1-204ENST00000601038 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
SCAF1-204ENST00000601038 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
SCAF1-204ENST00000601038 IGHV3-49A0A0A0MS15 119 aa12.53□□□□□ -0.4
SCAF1-204ENST00000601038 GNG7O60262 68 aa12.53□□□□□ -0.4
SCAF1-204ENST00000601038 HPGDSO60760 199 aa12.53□□□□□ -0.4
SCAF1-204ENST00000601038 LY6G6CO95867 125 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms