RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SNX29P2Q8IUI4 249 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 OR4A16Q8NH70 328 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 GPX8Q8TED1 209 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 SCARB1Q8WTV0 552 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 CMTM3Q96MX0 182 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 SCPEP1Q9HB40 452 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 FAM212BQ9NTI7 297 aaPredicted RBP7.32□□□□□ -1.24
VRK3-216ENST00000599342 TMEM14BQ9NUH8 114 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 UBQLN2Q9UHD9 624 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 RYR2Q92736 4967 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 IGHV3OR16-8A0A075B7F1 116 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 K7EIM0 57 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
VRK3-216ENST00000599342 MFAP2P55001 183 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 VBP1P61758 197 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 NCS1P62166 190 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 RELQ04864 619 aaPredicted RBP7.31□□□□□ -1.24
VRK3-216ENST00000599342 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 OR1P1Q8NH06 330 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 MISP3Q96FF7 219 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 CHRDL1Q9BU40 450 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 FUNDC2Q9BWH2 189 aa7.31□□□□□ -1.24
VRK3-216ENST00000599342 TENM2Q9NT68 2774 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 DBX1A6NMT0 343 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 C15orf62A8K5M9 175 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 FAM25AB3EWG3 89 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 FAM25CB3EWG5 89 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 FAM25GB3EWG6 89 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
VRK3-216ENST00000599342 K7EMT4 169 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 ZNF207O43670 478 aaKnown RBP7.3□□□□□ -1.24
VRK3-216ENST00000599342 HPGDSO60760 199 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 YIF1AO95070 293 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 RORCP51449 518 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 UCP3P55916 312 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 AP3S1Q92572 193 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 MRGPRFQ96AM1 343 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 PINX1Q96BK5 328 aaKnown RBP7.3□□□□□ -1.24
VRK3-216ENST00000599342 SEC22AQ96IW7 307 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 OVOL2Q9BRP0 275 aa7.3□□□□□ -1.24
VRK3-216ENST00000599342 M0QYG6 137 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 UBE2CO00762 179 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 SPRY2O43597 315 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 PGAM2P15259 253 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 ELK1P19419 428 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 BMI1P35226 326 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 ADMP35318 185 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 AKR1C2P52895 323 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 MFAP4P55083 255 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 ERHP84090 104 aaKnown RBP7.29□□□□□ -1.24
VRK3-216ENST00000599342 PRCDQ00LT1 54 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 DEFB135Q30KP9 77 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 RNASE12Q5GAN4 147 aaKnown RBP7.29□□□□□ -1.24
VRK3-216ENST00000599342 RNASE10Q5GAN6 216 aaKnown RBP7.29□□□□□ -1.24
VRK3-216ENST00000599342 Q6ZWC4 215 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 STPG3Q8N7X2 389 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 ZNF114Q8NC26 417 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 TXN2Q99757 166 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 C6orf62Q9GZU0 229 aaPredicted RBP7.29□□□□□ -1.24
VRK3-216ENST00000599342 TP53TG1Q9Y2A0 90 aa7.29□□□□□ -1.24
VRK3-216ENST00000599342 KIR2DL5BA0A0G2JN68 375 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 KIR2DL5BA0A0G2JPC4 375 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 A0A0J9YWU9 116 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 CXorf65A6NEN9 183 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 I3L2K1 104 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 GNG7O60262 68 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 MT-CO2P00403 227 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 IGKV1-39P01597 117 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 IGKV1D-39P04432 117 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 CTSDP07339 412 aaPredicted RBP7.28□□□□□ -1.24
VRK3-216ENST00000599342 CTSGP08311 255 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
VRK3-216ENST00000599342 HSPE1P61604 102 aaKnown RBP7.28□□□□□ -1.24
VRK3-216ENST00000599342 PMS2P11Q13670 270 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 KIR2DL5AQ8N109 375 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 SLC35G3Q8N808 338 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 TMEM116Q8NCL8 245 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 KIR2DL5BQ8NHK3 375 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 GALNT14Q96FL9 552 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 ZNF486Q96H40 463 aaPredicted RBP7.28□□□□□ -1.24
VRK3-216ENST00000599342 GINS3Q9BRX5 216 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 PDCD10Q9BUL8 212 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 RHPN1-AS1Q9BWJ2 59 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 SMPXQ9UHP9 88 aa7.28□□□□□ -1.24
VRK3-216ENST00000599342 IGKV3-7A0A075B6H7 116 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 TRAV14DV4A0A0A6YYC5 116 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 NUPR2A6NF83 97 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 CHEK1O14757 476 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 ATG12O94817 140 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 IFNA17P01571 189 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
VRK3-216ENST00000599342 SNCAP37840 140 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 TFPI2P48307 235 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 PPP5CP53041 499 aa7.27□□□□□ -1.25
VRK3-216ENST00000599342 PIGPP57054 158 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms