RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MCUBQ9NWR8 336 aa10.79□□□□□ -0.68
LIG1-218ENST00000599322 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
LIG1-218ENST00000599322 KLK9Q9UKQ9 250 aa10.79□□□□□ -0.68
LIG1-218ENST00000599322 S4R3C0 116 aa10.79□□□□□ -0.68
LIG1-218ENST00000599322 SORL1Q92673 2214 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
LIG1-218ENST00000599322 GPR183P32249 361 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 SNCAP37840 140 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 DHODHQ02127 395 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 WT1-ASQ06250 92 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 PYDC2Q56P42 97 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 SPSB3Q6PJ21 355 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 HAPLN4Q86UW8 402 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 OR4D10Q8NGI6 311 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 ATP6V0BQ99437 205 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 TUBA4BQ9H853 241 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 SLC2A8Q9NY64 477 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 UFC1Q9Y3C8 167 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 CEPT1Q9Y6K0 416 aa10.78□□□□□ -0.68
LIG1-218ENST00000599322 MFSD2BA6NFX1 497 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 HLA-AP01891 365 aaKnown RBP10.77□□□□□ -0.69
LIG1-218ENST00000599322 PRCDQ00LT1 54 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 Q56UQ5 140 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 UBAC2Q8NBM4 344 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 OR4C16Q8NGL9 310 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 OR1P1Q8NH06 330 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 ZNF502Q8TBZ5 544 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 MARC2Q969Z3 335 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 BSCL2Q96G97 398 aaPredicted RBP10.77□□□□□ -0.69
LIG1-218ENST00000599322 CCDC140Q96MF4 163 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 TP53RKQ96S44 253 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 ASCL2Q99929 193 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
LIG1-218ENST00000599322 ZMAT4Q9H898 229 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
LIG1-218ENST00000599322 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 C2orf70A6NJV1 201 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 ZNF701M0R085 212 aaPredicted RBP10.76□□□□□ -0.69
LIG1-218ENST00000599322 ANXA3P12429 323 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 FOLR2P14207 255 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 INPP1P49441 399 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 SP6Q3SY56 376 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 IL34Q6ZMJ4 242 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 FAM219AQ8IW50 185 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 OR51S1Q8NGJ8 323 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 MISP3Q96FF7 219 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 NXF2Q9GZY0 626 aaKnown RBP10.76□□□□□ -0.69
LIG1-218ENST00000599322 NAA60Q9H7X0 242 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 U3KQK5 164 aa10.76□□□□□ -0.69
LIG1-218ENST00000599322 NUPL2O15504 423 aaKnown RBP10.75□□□□□ -0.69
LIG1-218ENST00000599322 TGOLN2O43493 480 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 SCGB2A1O75556 95 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 CBLN1P23435 193 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 UCP1P25874 307 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 HOXA1P49639 335 aaPredicted RBP10.75□□□□□ -0.69
LIG1-218ENST00000599322 MFAP4P55083 255 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 ELLP55199 621 aaPredicted RBP10.75□□□□□ -0.69
LIG1-218ENST00000599322 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 SPANXN2Q5MJ10 180 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 FAAP20Q6NZ36 180 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 TOMM5Q8N4H5 51 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 OR2C3Q8N628 320 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 TMEM222Q9H0R3 208 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 ZC4H2Q9NQZ6 224 aa10.75□□□□□ -0.69
LIG1-218ENST00000599322 OR2T8A6NH00 312 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 CORTO00230 105 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 OR5AC1P0C628 307 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 FRMD6-AS1P0C7T7 363 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 DEFB114Q30KQ6 69 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 SLC16A13Q7RTY0 426 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 UXS1Q8NBZ7 420 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 SCARB1Q8WTV0 552 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 RBPMSQ93062 196 aaKnown RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 TXN2Q99757 166 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
LIG1-218ENST00000599322 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
LIG1-218ENST00000599322 IGHV3-21A0A0B4J1V1 117 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 A8MWP6 167 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 CDS2O95674 445 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 NPBWR1P48145 328 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 CD81P60033 236 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
LIG1-218ENST00000599322 LAMTOR1Q6IAA8 161 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 RTBDNQ9BSG5 229 aaPredicted RBP10.73□□□□□ -0.69
LIG1-218ENST00000599322 DMRT1Q9Y5R6 373 aa10.73□□□□□ -0.69
LIG1-218ENST00000599322 CRYM-AS1A6NIL9 109 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms