RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
IRF3-208ENST00000594387 GAR1Q9NY12 217 aaKnown RBP13.2□□□□□ -0.3
IRF3-208ENST00000594387 CEPT1Q9Y6K0 416 aa13.2□□□□□ -0.3
IRF3-208ENST00000594387 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
IRF3-208ENST00000594387 C2orf70A6NJV1 201 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
IRF3-208ENST00000594387 IFNA17P01571 189 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 FRMD6-AS1P0C7T7 363 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 FOLR2P14207 255 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 SNCAP37840 140 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 SLC35G3Q8N808 338 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 OR4C16Q8NGL9 310 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 ATP6V0BQ99437 205 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 TUBA4BQ9H853 241 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 ZMAT4Q9H898 229 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 ZC4H2Q9NQZ6 224 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 MCUBQ9NWR8 336 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 UFC1Q9Y3C8 167 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 DMRT1Q9Y5R6 373 aa13.19□□□□□ -0.3
IRF3-208ENST00000594387 CBLN1P23435 193 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 FAUP35544 74 aaKnown RBP13.18□□□□□ -0.3
IRF3-208ENST00000594387 SUB1P53999 127 aaKnown RBP eCLIP13.18□□□□□ -0.3
IRF3-208ENST00000594387 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 DHODHQ02127 395 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 GUCA2BQ16661 112 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 SP6Q3SY56 376 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 Q56UQ5 140 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 SPSB3Q6PJ21 355 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 UBAC2Q8NBM4 344 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 OR1P1Q8NH06 330 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 BSCL2Q96G97 398 aaPredicted RBP13.18□□□□□ -0.3
IRF3-208ENST00000594387 WWC2-AS2Q96NR7 200 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 SLC2A8Q9NY64 477 aa13.18□□□□□ -0.3
IRF3-208ENST00000594387 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 OR2T8A6NH00 312 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 TGOLN2O43493 480 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 UCP1P25874 307 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 AP3S2P59780 193 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 DEFB114Q30KQ6 69 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 CD300EQ496F6 205 aaPredicted RBP13.17□□□□□ -0.3
IRF3-208ENST00000594387 PYDC2Q56P42 97 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 SCARB1Q8WTV0 552 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 MARC2Q969Z3 335 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
IRF3-208ENST00000594387 THAP7Q9BT49 309 aaPredicted RBP13.17□□□□□ -0.3
IRF3-208ENST00000594387 NXF2Q9GZY0 626 aaKnown RBP13.17□□□□□ -0.3
IRF3-208ENST00000594387 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 DBX1A6NMT0 343 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 IGHV4-30-4P0DP06 118 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
IRF3-208ENST00000594387 ZNF57Q68EA5 555 aaPredicted RBP13.16□□□□□ -0.3
IRF3-208ENST00000594387 FAM219AQ8IW50 185 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 NAA60Q9H7X0 242 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
IRF3-208ENST00000594387 A8MWP6 167 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 MFAP4P55083 255 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 ANKRD55Q3KP44 614 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
IRF3-208ENST00000594387 SBSPONQ8IVN8 264 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 Q8N1Y9 231 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 UXS1Q8NBZ7 420 aa13.15□□□□□ -0.3
IRF3-208ENST00000594387 RTBDNQ9BSG5 229 aaPredicted RBP13.15□□□□□ -0.3
IRF3-208ENST00000594387 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.3
IRF3-208ENST00000594387 IGHV3-35A0A0C4DH35 117 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 A8MZ25 164 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 CDS2O95674 445 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 MFAP2P55001 183 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 CD81P60033 236 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 RELQ04864 619 aaPredicted RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 TXN2Q99757 166 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 ZNF436Q9C0F3 470 aaPredicted RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
IRF3-208ENST00000594387 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
IRF3-208ENST00000594387 DNAH3Q8TD57 4116 aa13.13□□□□□ -0.31
IRF3-208ENST00000594387 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
IRF3-208ENST00000594387 CORTO00230 105 aa13.13□□□□□ -0.31
IRF3-208ENST00000594387 NDUFA4O00483 81 aa13.13□□□□□ -0.31
IRF3-208ENST00000594387 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
IRF3-208ENST00000594387 ANXA3P12429 323 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms